Variant report
| Variant | rs6778918 |
|---|---|
| Chromosome Location | chr3:68422453-68422454 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:7)
| rs_ID | r2[population] |
|---|---|
| rs17047573 | 1.00[CEU][hapmap] |
| rs6779953 | 1.00[YRI][hapmap] |
| rs6780812 | 1.00[CEU][hapmap] |
| rs6798891 | 1.00[CEU][hapmap];1.00[EUR][1000 genomes] |
| rs73836901 | 1.00[EUR][1000 genomes] |
| rs7629385 | 1.00[CEU][hapmap] |
| rs7640148 | 1.00[CEU][hapmap];1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv834721 | chr3:68365963-68526394 | Weak transcription Enhancers ZNF genes & repeats Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 2 | nsv590562 | chr3:68393781-68422687 | Enhancers Weak transcription | n/a | n/a | inside rSNPs | diseases |
| 3 | nsv590563 | chr3:68402933-68422687 | Enhancers Weak transcription | n/a | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
