The 2.0 version of rSNPBase

Variant report

Variant rs6779002
Chromosome Location chr3:113132934-113132935
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:113074400-113184400 Weak transcription Hela-S3 cervix
2 chr3:113080800-113143800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:113092400-113134200 Weak transcription Fetal Kidney kidney
4 chr3:113093600-113134800 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr3:113098800-113134800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr3:113099000-113134800 Weak transcription A549 lung
7 chr3:113099600-113144800 Weak transcription Rectal Smooth Muscle rectum
8 chr3:113102200-113148800 Weak transcription Brain Angular Gyrus brain
9 chr3:113102400-113144400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr3:113106800-113143600 Weak transcription Dnd41 blood
11 chr3:113107000-113137000 Weak transcription Esophagus oesophagus
12 chr3:113107200-113145200 Weak transcription Aorta Aorta
13 chr3:113107600-113138200 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr3:113109200-113159800 Weak transcription Brain Hippocampus Middle brain
15 chr3:113111600-113146400 Weak transcription Brain Substantia Nigra brain
16 chr3:113112200-113148400 Weak transcription Brain Anterior Caudate brain
17 chr3:113113000-113145600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr3:113114000-113143800 Weak transcription Fetal Thymus thymus
19 chr3:113117600-113148400 Weak transcription Placenta Placenta
20 chr3:113118000-113134800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr3:113119600-113145200 Weak transcription Lung lung
22 chr3:113121600-113134600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr3:113122400-113138400 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr3:113122400-113144800 Weak transcription Pancreas Pancrea
25 chr3:113122800-113134200 Weak transcription Primary hematopoietic stem cells blood
26 chr3:113122800-113138000 Weak transcription Stomach Smooth Muscle stomach
27 chr3:113122800-113138600 Weak transcription Primary B cells from cord blood blood
28 chr3:113122800-113144000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr3:113122800-113144000 Weak transcription Thymus Thymus
30 chr3:113122800-113144800 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr3:113123000-113133600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr3:113123000-113133600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr3:113123000-113134000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr3:113123000-113134800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr3:113123000-113143600 Weak transcription Left Ventricle heart
36 chr3:113123000-113144400 Weak transcription HSMM muscle
37 chr3:113123200-113143800 Weak transcription Ovary ovary
38 chr3:113123600-113143200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr3:113123800-113134800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr3:113124600-113143600 Weak transcription Colon Smooth Muscle Colon
41 chr3:113124800-113133600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr3:113125000-113138000 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr3:113129000-113142600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr3:113132400-113134200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr3:113132600-113146400 Weak transcription Right Ventricle heart
46 chr3:113132800-113134200 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr3:113132800-113137800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015