Variant report

Variant	rs67820986
Chromosome Location	chr14:69187110-69187111
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69186666..69188197-chr14:69195401..69198346,2	K562	blood:
2	chr14:69185841..69187521-chr14:69260406..69261940,2	K562	blood:
3	chr14:69185847..69187659-chr14:69204580..69206147,2	K562	blood:
4	chr14:69186631..69190079-chr14:69260120..69263014,4	K562	blood:
5	chr14:69183888..69188009-chr14:69213725..69217312,4	K562	blood:
6	chr14:69185412..69187789-chr14:69192194..69193757,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10142607	0.93[ASN][1000 genomes]
rs10483821	0.96[ASN][1000 genomes]
rs11626345	0.93[ASN][1000 genomes]
rs2025053	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2043672	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55761709	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66739722	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs66993211	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72729601	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72731509	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72731514	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8013316	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8015998	0.96[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69173600-69194200	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr14:69173600-69196400	Weak transcription	Right Ventricle	heart
3	chr14:69176600-69189400	Weak transcription	Pancreas	Pancrea
4	chr14:69181000-69191400	Weak transcription	Fetal Muscle Trunk	muscle
5	chr14:69181000-69195200	Weak transcription	Spleen	Spleen
6	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr14:69182200-69191200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:69184200-69188600	Weak transcription	Placenta	Placenta
9	chr14:69184400-69187600	Weak transcription	Fetal Intestine Small	intestine
10	chr14:69184400-69188400	Weak transcription	Fetal Intestine Large	intestine
11	chr14:69184800-69188800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr14:69185000-69187200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
13	chr14:69185200-69187200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
14	chr14:69185200-69187400	Enhancers	Primary T killer memory cells from peripheral blood	blood
15	chr14:69185400-69187200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr14:69185600-69187200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr14:69185800-69187200	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr14:69185800-69188400	Weak transcription	HepG2	liver
19	chr14:69186200-69187400	Enhancers	Primary T helper cells fromperipheralblood	blood
20	chr14:69186600-69187200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
21	chr14:69186800-69187200	Flanking Active TSS	K562	blood
22	chr14:69187000-69187400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
23	chr14:69187000-69187800	Weak transcription	Ovary	ovary
24	chr14:69187000-69194200	Weak transcription	HUVEC	blood vessel

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