Variant report

Variant	rs72731514
Chromosome Location	chr14:69200264-69200265
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69199814..69201637-chr14:69202676..69204761,2	K562	blood:
2	chr14:69195838..69197369-chr14:69197618..69200440,2	K562	blood:
3	chr14:69195069..69196789-chr14:69199130..69200741,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000207089	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10142607	0.89[ASN][1000 genomes]
rs10483821	0.86[ASN][1000 genomes]
rs11626345	0.89[ASN][1000 genomes]
rs2025053	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2043672	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55761709	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66739722	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66993211	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs67820986	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72729601	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72731509	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8013316	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8015998	0.86[ASN][1000 genomes]

No data

Chromatin state (count:91 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69182000-69202600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr14:69193000-69200800	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr14:69195200-69201600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr14:69195600-69202800	Weak transcription	Fetal Kidney	kidney
5	chr14:69196000-69200800	Weak transcription	Duodenum Mucosa	Duodenum
6	chr14:69196200-69200400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr14:69196400-69200800	Weak transcription	Small Intestine	intestine
8	chr14:69196400-69201600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr14:69196400-69203600	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr14:69196600-69201000	Weak transcription	Fetal Intestine Small	intestine
11	chr14:69196600-69201000	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr14:69196600-69203200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr14:69196800-69200600	Weak transcription	HUVEC	blood vessel
14	chr14:69196800-69201000	Weak transcription	K562	blood
15	chr14:69197400-69201200	Enhancers	Brain Anterior Caudate	brain
16	chr14:69197800-69202200	Enhancers	Primary monocytes fromperipheralblood	blood
17	chr14:69198200-69203000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr14:69198200-69203000	Enhancers	Primary hematopoietic stem cells short term culture	blood
19	chr14:69198400-69200800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr14:69198400-69201200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr14:69198400-69202400	Weak transcription	Ovary	ovary
22	chr14:69198400-69203400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr14:69198400-69214000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
24	chr14:69198600-69201200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr14:69198600-69202400	Weak transcription	HSMMtube	muscle
26	chr14:69198600-69203000	Weak transcription	HUES6 Cell Line	embryonic stem cell
27	chr14:69198800-69201000	Weak transcription	Fetal Brain Female	brain
28	chr14:69198800-69201000	Weak transcription	Fetal Lung	lung
29	chr14:69198800-69202200	Enhancers	Primary hematopoietic stem cells	blood
30	chr14:69198800-69202800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr14:69198800-69203200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
32	chr14:69199000-69201800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
33	chr14:69199000-69202800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
34	chr14:69199000-69203000	Weak transcription	HUES64 Cell Line	embryonic stem cell
35	chr14:69199000-69203600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr14:69199200-69202800	Weak transcription	HepG2	liver
37	chr14:69199200-69204400	Enhancers	Brain Germinal Matrix	brain
38	chr14:69199400-69202000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr14:69199400-69203800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
40	chr14:69199600-69202000	Enhancers	Primary T cells from cord blood	blood
41	chr14:69199600-69206800	Enhancers	Fetal Muscle Leg	muscle
42	chr14:69199800-69200400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr14:69199800-69200600	Enhancers	Brain Angular Gyrus	brain
44	chr14:69199800-69200600	Enhancers	Fetal Heart	heart
45	chr14:69199800-69201200	Enhancers	Lung	lung
46	chr14:69199800-69201400	Enhancers	Fetal Intestine Large	intestine
47	chr14:69199800-69202000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr14:69199800-69202200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
49	chr14:69199800-69202600	Enhancers	Primary T helper cells PMA-I stimulated	--
50	chr14:69199800-69202600	Enhancers	Primary T helper cells fromperipheralblood	blood

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