Variant report
| Variant | rs6788215 |
|---|---|
| Chromosome Location | chr3:111682042-111682043 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:111637200-111690600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr3:111642200-111690400 | Weak transcription | Spleen | Spleen |
| 3 | chr3:111645400-111689600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 4 | chr3:111652400-111685800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 5 | chr3:111653000-111686200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 6 | chr3:111654400-111695000 | Strong transcription | Placenta | Placenta |
| 7 | chr3:111658600-111697400 | Weak transcription | Gastric | stomach |
| 8 | chr3:111658800-111685800 | Weak transcription | HepG2 | liver |
| 9 | chr3:111661600-111689800 | Weak transcription | Ovary | ovary |
| 10 | chr3:111666600-111697400 | Weak transcription | Esophagus | oesophagus |
| 11 | chr3:111670800-111685000 | Strong transcription | Liver | Liver |
| 12 | chr3:111672800-111686000 | Weak transcription | Fetal Intestine Small | intestine |
| 13 | chr3:111673000-111688400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 14 | chr3:111673000-111688400 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr3:111673000-111697400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 16 | chr3:111673000-111697400 | Weak transcription | Pancreas | Pancrea |
| 17 | chr3:111673600-111686000 | Weak transcription | Fetal Kidney | kidney |
| 18 | chr3:111675000-111682600 | Weak transcription | Colon Smooth Muscle | Colon |
| 19 | chr3:111675000-111697400 | Weak transcription | Lung | lung |
| 20 | chr3:111675800-111685200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 21 | chr3:111676800-111685800 | Weak transcription | Fetal Lung | lung |
| 22 | chr3:111678200-111683400 | Strong transcription | Left Ventricle | heart |
| 23 | chr3:111678200-111687800 | Weak transcription | Right Ventricle | heart |
| 24 | chr3:111678200-111692800 | Weak transcription | Aorta | Aorta |
| 25 | chr3:111678400-111682800 | Weak transcription | HSMMtube | muscle |
| 26 | chr3:111678400-111685600 | Strong transcription | Adipose Nuclei | Adipose |
| 27 | chr3:111680200-111682400 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 28 | chr3:111680200-111683200 | Enhancers | NHDF-Ad | bronchial |
| 29 | chr3:111680400-111683600 | Genic enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr3:111680600-111683000 | Genic enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr3:111680600-111683600 | Strong transcription | Fetal Intestine Large | intestine |
| 32 | chr3:111680600-111684200 | Strong transcription | Fetal Muscle Leg | muscle |
| 33 | chr3:111680600-111686400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 34 | chr3:111680800-111682600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr3:111680800-111683200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 36 | chr3:111681000-111682800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 37 | chr3:111681000-111683000 | Strong transcription | Fetal Muscle Trunk | muscle |
| 38 | chr3:111681000-111683600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 39 | chr3:111681000-111685800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 40 | chr3:111681000-111686000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 41 | chr3:111681000-111686000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 42 | chr3:111681200-111682800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 43 | chr3:111681200-111682800 | Genic enhancers | NHEK | skin |
| 44 | chr3:111681200-111683200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 45 | chr3:111681200-111686000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 46 | chr3:111681200-111686400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 47 | chr3:111681200-111686400 | Weak transcription | Fetal Thymus | thymus |
| 48 | chr3:111681200-111689800 | Weak transcription | Thymus | Thymus |
| 49 | chr3:111681400-111683800 | Weak transcription | Fetal Heart | heart |
| 50 | chr3:111681400-111685600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
