Variant report

Variant	rs67886810
Chromosome Location	chr2:180309157-180309158
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs16866735	0.84[AFR][1000 genomes];0.85[EUR][1000 genomes]
rs2292820	0.85[EUR][1000 genomes]
rs3749123	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67034434	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72968267	0.84[AFR][1000 genomes];0.85[EUR][1000 genomes]

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180306600-180311400	Strong transcription	Liver	Liver
2	chr2:180307000-180309800	Enhancers	Placenta Amnion	Placenta Amnion
3	chr2:180307000-180310200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr2:180307200-180310400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
5	chr2:180307400-180309800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr2:180307400-180310200	Enhancers	H1 Cell Line	embryonic stem cell
7	chr2:180307400-180310200	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr2:180307400-180310600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr2:180307400-180312800	Enhancers	NHEK	skin
10	chr2:180307600-180309800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr2:180307800-180309200	Genic enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr2:180307800-180310200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr2:180307800-180310600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr2:180307800-180320800	Weak transcription	HepG2	liver
15	chr2:180308000-180309200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr2:180308000-180309800	Enhancers	Fetal Intestine Large	intestine
17	chr2:180308000-180310400	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr2:180308200-180309200	Enhancers	Primary neutrophils fromperipheralblood	blood
19	chr2:180308200-180310200	Enhancers	HUES48 Cell Line	embryonic stem cell
20	chr2:180308200-180332600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr2:180308400-180310400	Enhancers	H9 Cell Line	embryonic stem cell
22	chr2:180308600-180309200	Enhancers	Fetal Lung	lung
23	chr2:180308600-180309400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr2:180308600-180309800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr2:180308600-180309800	Enhancers	Fetal Intestine Small	intestine
26	chr2:180308600-180310200	Enhancers	HUES6 Cell Line	embryonic stem cell
27	chr2:180308600-180310400	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr2:180308600-180310600	Enhancers	iPS-15b Cell Line	embryonic stem cell
29	chr2:180308600-180311200	Weak transcription	HMEC	breast
30	chr2:180308800-180309200	Enhancers	Skeletal Muscle Male	skeletal muscle
31	chr2:180308800-180309400	Enhancers	Fetal Brain Female	brain
32	chr2:180308800-180311400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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