Variant report

Variant rs6789643
Chromosome Location chr3:16943369-16943370
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:16928000-16948800 Weak transcription Lung lung
2 chr3:16930000-16946400 Weak transcription Fetal Brain Male brain
3 chr3:16931200-16952400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr3:16932600-16946400 Weak transcription H9 Cell Line embryonic stem cell
5 chr3:16933000-16945000 Weak transcription Aorta Aorta
6 chr3:16933200-16945800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr3:16933800-16948200 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr3:16936200-16949600 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr3:16937400-16949400 Enhancers Primary Natural Killer cells fromperipheralblood blood
10 chr3:16937800-16947400 Enhancers Fetal Thymus thymus
11 chr3:16939200-16948400 Weak transcription Fetal Stomach stomach
12 chr3:16939400-16950000 Weak transcription Fetal Muscle Leg muscle
13 chr3:16939600-16945000 Enhancers Skeletal Muscle Male skeletal muscle
14 chr3:16939800-16948800 Weak transcription Fetal Kidney kidney
15 chr3:16940200-16944000 Active TSS Fetal Heart heart
16 chr3:16940200-16946600 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr3:16940400-16948800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr3:16940600-16944600 Enhancers Primary T regulatory cells fromperipheralblood blood
19 chr3:16940800-16944400 Weak transcription Fetal Brain Female brain
20 chr3:16940800-16945800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr3:16940800-16947200 Weak transcription Adipose Nuclei Adipose
22 chr3:16940800-16948400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr3:16940800-16950000 Weak transcription Esophagus oesophagus
24 chr3:16940800-16954200 Weak transcription Brain Cingulate Gyrus brain
25 chr3:16940800-16962200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr3:16941200-16945400 Enhancers Primary B cells from cord blood blood
27 chr3:16941200-16948200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr3:16941600-16943800 Flanking Active TSS Primary T cells from cord blood blood
29 chr3:16941800-16959400 Enhancers Primary B cells from peripheral blood blood
30 chr3:16942000-16943600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
31 chr3:16942000-16943600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
32 chr3:16942000-16943600 Enhancers Thymus Thymus
33 chr3:16942000-16943600 Enhancers Dnd41 blood
34 chr3:16942000-16944800 Enhancers GM12878-XiMat blood
35 chr3:16942000-16947600 Enhancers Ovary ovary
36 chr3:16942200-16943400 Flanking Active TSS Primary T cells fromperipheralblood blood
37 chr3:16942200-16943400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
38 chr3:16942200-16943600 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr3:16942200-16943600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr3:16942200-16943600 Enhancers Gastric stomach
41 chr3:16942200-16943600 Enhancers Small Intestine intestine
42 chr3:16942200-16943600 Enhancers Spleen Spleen
43 chr3:16942200-16943800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
44 chr3:16942200-16943800 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr3:16942200-16943800 Enhancers Right Atrium heart
46 chr3:16942200-16947600 Enhancers Psoas Muscle Psoas
47 chr3:16942400-16947200 Weak transcription Liver Liver
48 chr3:16942600-16943600 Enhancers Brain Substantia Nigra brain
49 chr3:16942600-16944400 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr3:16942800-16943400 Enhancers Duodenum Mucosa Duodenum

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