Variant report

Variant	rs73146966
Chromosome Location	chr3:16973164-16973165
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:16973145-16973195	HepG2	liver:	n/a
2	chr3:16973145-16973195	PFSK-1	brain:	n/a
3	chr3:16973145-16973195	HUVEC	blood vessel:	n/a
4	chr3:16973145-16973195	HCM	heart:	n/a
5	chr3:16973145-16973195	GM12878	blood:	n/a
6	chr3:16973145-16973195	GM19239	blood:	n/a
7	chr3:16973145-16973195	HAEpiC	amniotic membrane:	n/a
8	chr3:16973145-16973195	HCPEpiC	choroid plexus:	n/a
9	chr3:16973145-16973195	GM12892	blood:	n/a
10	chr3:16973145-16973195	U87	brain:	n/a
11	chr3:16973145-16973195	HEEpiC	esophagus:	n/a
12	chr3:16973145-16973195	NHBE	bronchial:	n/a
13	chr3:16973145-16973195	NHDF-neo	bronchial:	n/a
14	chr3:16973145-16973195	MCF-7	breast:	n/a
15	chr3:16973145-16973195	Jurkat	blood:	n/a
16	chr3:16973145-16973195	HL-60	blood:	n/a
17	chr3:16973145-16973195	HNPCEpiC	eye:	n/a
18	chr3:16973145-16973195	NH-A	brain:	n/a
19	chr3:16973145-16973195	ProgFib	skin:	n/a
20	chr3:16973145-16973195	LNCaP	prostate:	n/a
21	chr3:16973145-16973195	AG04449	skin:	fetal
22	chr3:16973145-16973195	AoSMC	blood vessel:	n/a
23	chr3:16973145-16973195	IMR90	lung:	fetal
24	chr3:16973145-16973195	NT2-D1	testis:	n/a
25	chr3:16973145-16973195	PrEC	prostate:	n/a
26	chr3:16973145-16973195	HIPEpiC	eye:	n/a
27	chr3:16973145-16973195	T-47D	breast:	n/a
28	chr3:16973145-16973195	HEK293	kidney:	embryo
29	chr3:16973145-16973195	Caco-2	colon:	n/a
30	chr3:16973145-16973195	AG09319	gingival:	n/a
31	chr3:16973145-16973195	AG09309	skin:	n/a
32	chr3:16973145-16973195	AG04450	lung:	fetal
33	chr3:16973145-16973195	ECC-1	luminal epithelium:	n/a
34	chr3:16973145-16973195	NB4	blood:	n/a
35	chr3:16973145-16973195	SK-N-SH	brain:	n/a
36	chr3:16973145-16973195	CMK	blood:	n/a
37	chr3:16973145-16973195	MCF10A-Er-Src	breast:	n/a
38	chr3:16973145-16973195	BE2_C	brain:	n/a
39	chr3:16973145-16973195	Hepatocyte	liver:	n/a
40	chr3:16973145-16973195	ovcar-3	ovarian:	n/a
41	chr3:16973145-16973195	HMEC	breast:	n/a
42	chr3:16973145-16973195	HCF	heart:	n/a
43	chr3:16973145-16973195	H1-hESC	embryonic stem cell:	embryo
44	chr3:16973145-16973195	HRE	kidney:	n/a
45	chr3:16973145-16973195	GM12891	blood:	n/a
46	chr3:16973145-16973195	Hela-S3	cervix:	n/a
47	chr3:16973145-16973195	HRPEpiC	eye:	n/a
48	chr3:16973145-16973195	SKMC	muscle:	n/a
49	chr3:16973145-16973195	SAEC	small airway:	n/a
50	chr3:16973145-16973195	HRCEpiC	kidney:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:16971569..16973509-chr3:16977702..16980574,2	K562	blood:

No data

Variant related genes	Relation type
MIR3714	CpG island
PLCL2	CpG island

rs_ID	r²[population]
rs6789643	1.00[AFR][1000 genomes]
rs73146993	0.88[AFR][1000 genomes]

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:16958000-16981800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr3:16959400-16986600	Weak transcription	Aorta	Aorta
3	chr3:16965000-16979000	Weak transcription	Lung	lung
4	chr3:16967000-16985000	Enhancers	Primary T helper cells fromperipheralblood	blood
5	chr3:16967600-16977200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr3:16967800-16977800	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr3:16968400-16973200	Enhancers	Primary T helper cells PMA-I stimulated	--
8	chr3:16968800-16974000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr3:16969000-16974000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:16969000-16977400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
11	chr3:16969200-16973600	Enhancers	Fetal Heart	heart
12	chr3:16969600-16977400	Weak transcription	Fetal Thymus	thymus
13	chr3:16970000-16977000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr3:16970200-16974200	Weak transcription	Primary hematopoietic stem cells	blood
15	chr3:16970200-16974600	Weak transcription	Gastric	stomach
16	chr3:16970200-16975600	Weak transcription	Pancreas	Pancrea
17	chr3:16970400-16977400	Weak transcription	Thymus	Thymus
18	chr3:16970800-16977000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr3:16971400-16974000	Weak transcription	Stomach Mucosa	stomach
20	chr3:16971400-16974200	Weak transcription	Primary monocytes fromperipheralblood	blood
21	chr3:16971400-16975600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr3:16971600-16974000	Weak transcription	Monocytes-CD14+_RO01746	blood
23	chr3:16971600-16974600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr3:16971600-16974600	Weak transcription	Left Ventricle	heart
25	chr3:16971600-16975600	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr3:16971600-16975600	Weak transcription	Adipose Nuclei	Adipose
27	chr3:16971600-16975600	Weak transcription	Spleen	Spleen
28	chr3:16971600-16982400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
29	chr3:16971800-16973400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
30	chr3:16971800-16974200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
31	chr3:16972000-16977600	Weak transcription	Sigmoid Colon	Sigmoid Colon
32	chr3:16972200-16974600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
33	chr3:16972200-16977200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr3:16972400-16973800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
35	chr3:16972400-16974600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr3:16972400-16975600	Weak transcription	Psoas Muscle	Psoas
37	chr3:16972400-16983600	Weak transcription	Brain Angular Gyrus	brain
38	chr3:16972600-16973800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
39	chr3:16972600-16974200	Weak transcription	Primary T cells from cord blood	blood
40	chr3:16972600-16974200	Weak transcription	Ovary	ovary
41	chr3:16972600-16974200	Weak transcription	Skeletal Muscle Female	skeletal muscle
42	chr3:16972600-16974400	Weak transcription	Skeletal Muscle Male	skeletal muscle
43	chr3:16972600-16975600	Weak transcription	Right Ventricle	heart
44	chr3:16972600-16975800	Weak transcription	Right Atrium	heart
45	chr3:16972800-16973400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
46	chr3:16973000-16973600	ZNF genes & repeats	Primary B cells from peripheral blood	blood
47	chr3:16973000-16973600	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
48	chr3:16973000-16974000	ZNF genes & repeats	GM12878-XiMat	blood
49	chr3:16973000-16976400	Strong transcription	Primary B cells from cord blood	blood

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