Variant report

Variant	rs6795076
Chromosome Location	chr3:79089398-79089399
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12495750	1.00[CHD][hapmap]
rs13096526	1.00[CHD][hapmap];1.00[GIH][hapmap]
rs1349022	1.00[ASW][hapmap];1.00[CHD][hapmap];0.87[LWK][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap]
rs1374881	1.00[EUR][1000 genomes]
rs1374883	1.00[CHD][hapmap]
rs1550928	1.00[EUR][1000 genomes]
rs1550930	1.00[ASW][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs2121802	1.00[EUR][1000 genomes]
rs6548603	1.00[CHD][hapmap]
rs6548608	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834745	chr3:79055426-79227937	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:79087200-79090400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr3:79087200-79090600	Enhancers	Osteobl	bone
3	chr3:79088200-79089600	Weak transcription	NHDF-Ad	bronchial
4	chr3:79088600-79089400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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