The 2.0 version of rSNPBase

Variant report

Variant rs6802942
Chromosome Location chr3:135702704-135702705
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:135693600-135704000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr3:135694000-135713600 Weak transcription Fetal Lung lung
3 chr3:135694000-135726600 Weak transcription Esophagus oesophagus
4 chr3:135694200-135707400 Weak transcription Brain Cingulate Gyrus brain
5 chr3:135694200-135707400 Weak transcription Gastric stomach
6 chr3:135694200-135708800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr3:135694200-135709600 Weak transcription Right Atrium heart
8 chr3:135694200-135713400 Weak transcription Brain Hippocampus Middle brain
9 chr3:135699000-135703200 Enhancers Colon Smooth Muscle Colon
10 chr3:135699000-135704800 Enhancers Rectal Smooth Muscle rectum
11 chr3:135699600-135703400 Enhancers NHDF-Ad bronchial
12 chr3:135699800-135703200 Enhancers NHLF lung
13 chr3:135699800-135709600 Weak transcription Right Ventricle heart
14 chr3:135700200-135704200 Weak transcription Brain Substantia Nigra brain
15 chr3:135700400-135703400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr3:135700400-135708800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr3:135700600-135702800 Enhancers HMEC breast
18 chr3:135700800-135702800 Enhancers HSMM muscle
19 chr3:135700800-135703000 Enhancers Osteobl bone
20 chr3:135701000-135703200 Enhancers A549 lung
21 chr3:135701200-135703000 Enhancers NHEK skin
22 chr3:135701600-135720600 Weak transcription Ovary ovary
23 chr3:135701800-135703000 Enhancers Fetal Heart heart
24 chr3:135701800-135706600 Weak transcription Aorta Aorta
25 chr3:135701800-135707200 Weak transcription Stomach Smooth Muscle stomach
26 chr3:135702000-135703400 Weak transcription Psoas Muscle Psoas
27 chr3:135702000-135703600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr3:135702000-135704800 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:135702000-135705200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr3:135702200-135702800 Enhancers NH-A brain
31 chr3:135702200-135703600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr3:135702200-135706200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr3:135702200-135710200 Weak transcription HSMMtube muscle
34 chr3:135702600-135703200 Enhancers Muscle Satellite Cultured Cells --
35 chr3:135702600-135703400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr3:135702600-135704000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr3:135702600-135707800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:135702600-135708000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr3:135702600-135709800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr3:135702600-135710600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015