Variant report

Variant	rs6821848
Chromosome Location	chr4:103350758-103350759
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:103349348..103351015-chr4:103352564..103354082,2	K562	blood:
2	chr4:103265940..103267977-chr4:103349282..103352419,3	MCF-7	breast:
3	chr4:103263099..103266958-chr4:103348980..103352984,5	K562	blood:
4	chr4:103349492..103352803-chr4:103420968..103424398,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000109320	Chromatin interaction
ENSG00000138821	Chromatin interaction
ENSG00000260651	Chromatin interaction

rs_ID	r²[population]
rs17008528	1.00[CEU][hapmap];0.83[YRI][hapmap]
rs17032641	1.00[CEU][hapmap]
rs59494802	0.96[EUR][1000 genomes]
rs73834756	0.83[EUR][1000 genomes]
rs73837208	1.00[EUR][1000 genomes]

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103342400-103350800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr4:103348200-103351800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr4:103348800-103351600	Enhancers	Liver	Liver
4	chr4:103349200-103351600	Weak transcription	HepG2	liver
5	chr4:103349400-103351600	Weak transcription	Brain Anterior Caudate	brain
6	chr4:103349600-103351600	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr4:103350000-103351000	Enhancers	HMEC	breast
8	chr4:103350200-103350800	Flanking Active TSS	A549	lung
9	chr4:103350200-103351400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr4:103350400-103350800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr4:103350400-103351000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr4:103350400-103351000	Enhancers	NH-A	brain
13	chr4:103350400-103351000	Enhancers	NHLF	lung
14	chr4:103350400-103351200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr4:103350400-103351200	Enhancers	Muscle Satellite Cultured Cells	--
16	chr4:103350400-103351400	Enhancers	Dnd41	blood
17	chr4:103350400-103351400	Enhancers	NHDF-Ad	bronchial
18	chr4:103350400-103351600	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr4:103350600-103350800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr4:103350600-103350800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr4:103350600-103350800	Flanking Active TSS	Hela-S3	cervix
22	chr4:103350600-103351000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr4:103350600-103351000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr4:103350600-103351000	Enhancers	Fetal Lung	lung
25	chr4:103350600-103351000	Flanking Active TSS	NHEK	skin
26	chr4:103350600-103351200	Enhancers	Osteobl	bone
27	chr4:103350600-103351400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr4:103350600-103351400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr4:103350600-103351400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr4:103350600-103351600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr4:103350600-103351600	Enhancers	HUVEC	blood vessel
32	chr4:103350600-103351800	Enhancers	HSMM	muscle

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