Variant report

Variant rs6829897
Chromosome Location chr4:9535245-9535246
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:9533600-9535600 Active TSS Rectal Mucosa Donor 29 rectum
2 chr4:9533800-9535600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
3 chr4:9534000-9535400 Active TSS Duodenum Mucosa Duodenum
4 chr4:9534000-9535800 Active TSS Rectal Mucosa Donor 31 rectum
5 chr4:9534000-9536200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr4:9534600-9535400 Flanking Active TSS Fetal Thymus thymus
7 chr4:9534600-9541800 Weak transcription Stomach Mucosa stomach
8 chr4:9534800-9535600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr4:9534800-9536000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr4:9534800-9538800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr4:9534800-9538800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr4:9534800-9541600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr4:9534800-9542600 Weak transcription Thymus Thymus
14 chr4:9535000-9538600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr4:9535000-9542600 Weak transcription Colonic Mucosa Colon
16 chr4:9535200-9535400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
17 chr4:9535200-9535600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
18 chr4:9535200-9541600 Weak transcription Fetal Intestine Small intestine
19 chr4:9535200-9547600 Weak transcription iPS-15b Cell Line embryonic stem cell

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