Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs12651350	1.00[EUR][1000 genomes]
rs36224744	1.00[EUR][1000 genomes]
rs36224745	1.00[EUR][1000 genomes]
rs4692548	1.00[EUR][1000 genomes]
rs56656455	1.00[EUR][1000 genomes]
rs56834351	1.00[EUR][1000 genomes]
rs57269196	1.00[EUR][1000 genomes]
rs58297498	1.00[EUR][1000 genomes]
rs58551878	1.00[EUR][1000 genomes]
rs58990586	1.00[EUR][1000 genomes]
rs59082948	1.00[EUR][1000 genomes]
rs59902050	1.00[EUR][1000 genomes]
rs60016776	1.00[EUR][1000 genomes]
rs60212470	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60373412	1.00[EUR][1000 genomes]
rs60930192	1.00[EUR][1000 genomes]
rs61179790	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61239973	1.00[EUR][1000 genomes]
rs61299741	1.00[EUR][1000 genomes]
rs61557900	1.00[EUR][1000 genomes]
rs61681337	1.00[EUR][1000 genomes]
rs6825731	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6838102	1.00[EUR][1000 genomes]
rs6845307	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7659656	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7680701	1.00[AMR][1000 genomes]
rs7683070	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7689334	1.00[EUR][1000 genomes]
rs9291485	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762417	chr4:26491768-26576800	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26531000-26535400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr4:26532200-26536600	Weak transcription	HSMMtube	muscle
3	chr4:26533000-26533600	Enhancers	Rectal Smooth Muscle	rectum
4	chr4:26533200-26533600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr4:26533200-26533600	Enhancers	Colon Smooth Muscle	Colon
6	chr4:26533200-26533600	Enhancers	Fetal Lung	lung
7	chr4:26533200-26533800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:26533400-26533800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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