Variant report
Variant | rs6839820 |
---|---|
Chromosome Location | chr4:10296114-10296115 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr4:10119416..10121932-chr4:10294541..10296176,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10010656 | 0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10014800 | 0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs10023177 | 0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs10029208 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10031806 | 0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1017124 | 0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10489068 | 0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10938768 | 0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs10939801 | 0.81[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs10939818 | 0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs10939829 | 0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs11722345 | 0.80[ASN][1000 genomes] |
rs11724760 | 0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11727366 | 0.89[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs11730940 | 0.82[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11732092 | 0.89[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11734554 | 0.80[EUR][1000 genomes] |
rs11735623 | 0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11931317 | 0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs11932349 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11937220 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs11943393 | 0.91[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs11945358 | 0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12501750 | 0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1544599 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs1860895 | 0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1860904 | 0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs1860905 | 0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1860907 | 0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1964268 | 0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1974647 | 0.94[ASN][1000 genomes] |
rs2003565 | 0.80[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2007103 | 0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2024276 | 0.82[ASN][1000 genomes] |
rs2024281 | 0.82[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2024282 | 0.82[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2080077 | 0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2098236 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2098237 | 0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2110027 | 0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2192084 | 0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2192101 | 0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs231 | 0.80[EUR][1000 genomes] |
rs28507715 | 0.82[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs2868936 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs28705061 | 0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4282174 | 0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4306950 | 0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4463062 | 0.86[ASN][1000 genomes] |
rs4522862 | 0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4541507 | 0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4610325 | 0.82[ASN][1000 genomes] |
rs4697726 | 0.81[ASN][1000 genomes] |
rs4697744 | 0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4697747 | 0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4697748 | 0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4697749 | 0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4697750 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4697751 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4697752 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4697974 | 0.80[EUR][1000 genomes] |
rs4697977 | 0.80[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs4697984 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4697986 | 0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs4698017 | 0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4698018 | 0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4698025 | 0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4698028 | 0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4698033 | 0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs4698037 | 0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs4698041 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs4698043 | 0.91[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4698049 | 0.86[ASN][1000 genomes] |
rs56170676 | 0.82[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs59420943 | 0.85[ASN][1000 genomes] |
rs6447945 | 0.83[ASN][1000 genomes] |
rs6449355 | 0.81[EUR][1000 genomes] |
rs6449445 | 0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6449449 | 0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs6449451 | 0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs6449452 | 0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs6449454 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6810699 | 0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs6813712 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs6819959 | 0.83[ASN][1000 genomes] |
rs6826450 | 0.80[EUR][1000 genomes] |
rs6849037 | 0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6849583 | 0.90[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6851536 | 0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs6853056 | 0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs6855489 | 0.80[EUR][1000 genomes] |
rs6856707 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6857135 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs727995 | 0.90[ASN][1000 genomes] |
rs7441343 | 0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs757628 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs759024 | 0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs759027 | 0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs759031 | 0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs7661209 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7670709 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7675945 | 0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs7677806 | 0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs7680825 | 0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs7685241 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7688090 | 0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs769091 | 0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7697246 | 0.86[ASN][1000 genomes] |
rs917827 | 0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs978466 | 0.81[ASN][1000 genomes] |
rs984723 | 0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs9985952 | 0.90[ASN][1000 genomes] |
rs9990701 | 0.88[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs9994176 | 0.90[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv878681 | chr4:9802853-10397327 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 51 gene(s) | inside rSNPs | diseases |
2 | nsv997941 | chr4:9805223-10493388 | Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 54 gene(s) | inside rSNPs | diseases |
3 | nsv1008649 | chr4:9805223-10589802 | Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
4 | nsv1000587 | chr4:9805223-10610752 | Flanking Active TSS Enhancers Genic enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
5 | nsv537022 | chr4:9805223-10610752 | Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 56 gene(s) | inside rSNPs | diseases |
6 | nsv1003454 | chr4:9805223-10710990 | Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
7 | nsv537023 | chr4:9805223-10710990 | Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
8 | nsv1004801 | chr4:9814720-10674528 | Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
9 | nsv537024 | chr4:9814720-10674528 | Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
10 | nsv931483 | chr4:9814721-10716463 | Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
11 | nsv1009972 | chr4:9903566-10710990 | Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
12 | nsv537027 | chr4:9903566-10710990 | Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 58 gene(s) | inside rSNPs | diseases |
13 | esv2752052 | chr4:9911872-10313111 | Genic enhancers Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 51 gene(s) | inside rSNPs | diseases |
14 | nsv1010620 | chr4:9937123-10686682 | Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 57 gene(s) | inside rSNPs | diseases |
15 | nsv530280 | chr4:9947818-10940041 | Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 66 gene(s) | inside rSNPs | diseases |
16 | nsv532706 | chr4:9948018-10451450 | Weak transcription Genic enhancers Enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
17 | nsv878691 | chr4:9966477-10418078 | Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
18 | nsv1013487 | chr4:9972011-10320963 | Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 50 gene(s) | inside rSNPs | diseases |
19 | nsv869057 | chr4:10013411-10875454 | Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 65 gene(s) | inside rSNPs | diseases |
20 | nsv997936 | chr4:10040713-11009045 | Weak transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 65 gene(s) | inside rSNPs | diseases |
21 | nsv537033 | chr4:10069805-10297561 | Enhancers Genic enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 49 gene(s) | inside rSNPs | diseases |
22 | nsv537035 | chr4:10103058-10297561 | Transcr. at gene 5' and 3' Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 46 gene(s) | inside rSNPs | diseases |
23 | nsv593695 | chr4:10138470-10345548 | Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
24 | nsv1000177 | chr4:10212245-10557776 | Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
25 | nsv537037 | chr4:10212245-10557776 | Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 18 gene(s) | inside rSNPs | diseases |
26 | nsv1007206 | chr4:10229982-10362490 | Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
27 | nsv1013852 | chr4:10287118-10320963 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
28 | nsv963589 | chr4:10288617-10325163 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
29 | nsv1011107 | chr4:10290726-10324361 | Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:10291600-10296800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
2 | chr4:10292800-10297000 | Weak transcription | HMEC | breast |
3 | chr4:10293200-10296800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
4 | chr4:10293200-10298000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
5 | chr4:10294800-10297200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
6 | chr4:10295200-10296400 | Enhancers | Thymus | Thymus |