Variant report
| Variant | rs6841617 |
|---|---|
| Chromosome Location | chr4:46319006-46319007 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:24)
| rs_ID | r2[population] |
|---|---|
| rs11930936 | 1.00[EUR][1000 genomes] |
| rs11931406 | 1.00[EUR][1000 genomes] |
| rs11932060 | 0.82[YRI][hapmap] |
| rs11941602 | 1.00[EUR][1000 genomes] |
| rs1561774 | 0.92[YRI][hapmap] |
| rs16859279 | 0.85[YRI][hapmap];1.00[EUR][1000 genomes] |
| rs60164593 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61621790 | 1.00[EUR][1000 genomes] |
| rs6817334 | 1.00[EUR][1000 genomes] |
| rs6823288 | 1.00[EUR][1000 genomes] |
| rs6847406 | 1.00[EUR][1000 genomes] |
| rs6857343 | 0.87[YRI][hapmap] |
| rs73131372 | 1.00[EUR][1000 genomes] |
| rs73131375 | 1.00[EUR][1000 genomes] |
| rs73131382 | 1.00[EUR][1000 genomes] |
| rs73131383 | 1.00[EUR][1000 genomes] |
| rs73131384 | 1.00[EUR][1000 genomes] |
| rs73131388 | 1.00[EUR][1000 genomes] |
| rs73131396 | 0.97[AFR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73812846 | 1.00[EUR][1000 genomes] |
| rs7656097 | 1.00[EUR][1000 genomes] |
| rs7669344 | 1.00[EUR][1000 genomes] |
| rs7678520 | 0.80[YRI][hapmap] |
| rs7697639 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv527418 | chr4:46317923-46321863 | Enhancers | n/a | n/a | inside rSNPs | n/a |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:46317800-46319200 | Enhancers | Fetal Lung | lung |
