Variant report
| Variant | rs6851197 |
|---|---|
| Chromosome Location | chr4:81249452-81249453 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000197826 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:36)
| rs_ID | r2[population] |
|---|---|
| rs10006753 | 1.00[ASN][1000 genomes] |
| rs11932944 | 1.00[ASN][1000 genomes] |
| rs11934491 | 1.00[ASN][1000 genomes] |
| rs11935940 | 1.00[ASN][1000 genomes] |
| rs11937422 | 1.00[ASN][1000 genomes] |
| rs11938301 | 1.00[ASN][1000 genomes] |
| rs11940522 | 1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1458036 | 1.00[ASN][1000 genomes] |
| rs1458037 | 1.00[ASN][1000 genomes] |
| rs1603242 | 1.00[ASN][1000 genomes] |
| rs17004873 | 1.00[ASN][1000 genomes] |
| rs17004875 | 1.00[ASN][1000 genomes] |
| rs17004878 | 1.00[ASN][1000 genomes] |
| rs17004880 | 1.00[ASN][1000 genomes] |
| rs17004884 | 1.00[ASN][1000 genomes] |
| rs17004900 | 1.00[ASN][1000 genomes] |
| rs17004904 | 1.00[ASN][1000 genomes] |
| rs28565042 | 1.00[ASN][1000 genomes] |
| rs28869826 | 1.00[ASN][1000 genomes] |
| rs34576112 | 1.00[ASN][1000 genomes] |
| rs35166938 | 1.00[ASN][1000 genomes] |
| rs57739138 | 1.00[ASN][1000 genomes] |
| rs59661649 | 1.00[ASN][1000 genomes] |
| rs61429683 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs6821880 | 1.00[ASN][1000 genomes] |
| rs6844341 | 1.00[ASN][1000 genomes] |
| rs72873853 | 1.00[ASN][1000 genomes] |
| rs72873868 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72873869 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs72873874 | 1.00[ASN][1000 genomes] |
| rs7662417 | 1.00[ASN][1000 genomes] |
| rs7671275 | 1.00[ASN][1000 genomes] |
| rs7677540 | 1.00[ASN][1000 genomes] |
| rs7680532 | 1.00[ASN][1000 genomes] |
| rs7698891 | 1.00[ASN][1000 genomes] |
| rs9942234 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:81249200-81250600 | Weak transcription | Fetal Heart | heart |
