Variant report

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10003753	0.86[EUR][1000 genomes]
rs10018515	0.86[EUR][1000 genomes]
rs10018813	0.86[EUR][1000 genomes]
rs10018842	0.86[EUR][1000 genomes]
rs10021754	0.86[EUR][1000 genomes]
rs10033598	0.86[EUR][1000 genomes]
rs1105322	0.86[EUR][1000 genomes]
rs11941251	0.86[EUR][1000 genomes]
rs11945939	0.86[EUR][1000 genomes]
rs1268486	1.00[CEU][hapmap]
rs1528908	0.86[EUR][1000 genomes]
rs1729700	1.00[CEU][hapmap]
rs2367156	0.86[EUR][1000 genomes]
rs2367158	0.86[EUR][1000 genomes]
rs28840157	0.86[EUR][1000 genomes]
rs41438047	0.86[EUR][1000 genomes]
rs4453908	0.86[EUR][1000 genomes]
rs56268374	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs60557340	1.00[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6815239	0.86[EUR][1000 genomes]
rs6815771	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6820449	0.86[EUR][1000 genomes]
rs6822028	0.86[EUR][1000 genomes]
rs6822674	0.82[EUR][1000 genomes]
rs6852024	0.86[EUR][1000 genomes]
rs6852247	0.86[EUR][1000 genomes]
rs6852471	0.86[EUR][1000 genomes]
rs6856952	0.86[EUR][1000 genomes]
rs7670052	1.00[CEU][hapmap]
rs7690011	0.86[EUR][1000 genomes]
rs9995523	0.86[EUR][1000 genomes]
rs9995544	0.86[EUR][1000 genomes]
rs9996759	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3430875	chr4:74243646-74420354	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:74351000-74357200	Genic enhancers	Liver	Liver
2	chr4:74352200-74354000	Enhancers	Fetal Intestine Large	intestine
3	chr4:74352600-74353400	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr4:74352600-74353800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr4:74352800-74353600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr4:74352800-74354600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr4:74353000-74364800	Weak transcription	Fetal Intestine Small	intestine

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