Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10018501	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10440373	0.84[EUR][1000 genomes]
rs11731811	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11940919	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11940921	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13149430	0.92[ASN][1000 genomes]
rs1511294	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2089820	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2870658	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs3843409	0.87[EUR][1000 genomes]
rs3857063	0.80[AFR][1000 genomes]
rs4303949	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4376113	0.90[EUR][1000 genomes]
rs4475115	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4502650	0.90[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs4565050	0.91[EUR][1000 genomes]
rs4693305	0.85[AFR][1000 genomes]
rs6836646	0.82[EUR][1000 genomes]
rs6852513	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7680942	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9998068	0.83[AFR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007177	chr4:93834536-94155349	Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv537186	chr4:93834536-94155349	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv931937	chr4:93869856-94155348	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv1011740	chr4:93904073-94073963	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3374790	chr4:93959718-94063251	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv999660	chr4:93982635-94107714	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:93988400-94002000	Weak transcription	H1 Cell Line	embryonic stem cell

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