The 2.0 version of rSNPBase

Variant report

Variant rs686755
Chromosome Location chr6:161433034-161433035
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:161414200-161458200 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr6:161414400-161469600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr6:161414600-161442600 Weak transcription Primary B cells from cord blood blood
4 chr6:161414600-161457400 Weak transcription Primary hematopoietic stem cells blood
5 chr6:161415600-161450000 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr6:161416600-161475200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr6:161416800-161436200 Weak transcription Fetal Intestine Small intestine
8 chr6:161417400-161449000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr6:161417800-161433600 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr6:161418000-161434800 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr6:161418000-161448800 Weak transcription Lung lung
12 chr6:161420000-161434800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr6:161422800-161433600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr6:161422800-161434600 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr6:161422800-161441000 Weak transcription K562 blood
16 chr6:161423000-161443000 Weak transcription HepG2 liver
17 chr6:161423200-161433600 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr6:161423200-161436200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr6:161428600-161455800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:161430800-161435200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr6:161431000-161433800 Enhancers Muscle Satellite Cultured Cells --
22 chr6:161431000-161442400 Weak transcription Primary T cells fromperipheralblood blood
23 chr6:161431200-161433800 Enhancers NH-A brain
24 chr6:161431200-161433800 Enhancers NHDF-Ad bronchial
25 chr6:161431200-161434200 Enhancers Osteobl bone
26 chr6:161431200-161434400 Enhancers Pancreatic Islets Pancreatic Islet
27 chr6:161431200-161434800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr6:161431200-161435000 Enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr6:161431400-161433200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr6:161431400-161435000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:161431600-161433200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
32 chr6:161431600-161433800 Enhancers Cortex derived primary cultured neurospheres brain
33 chr6:161431600-161434000 Enhancers Rectal Smooth Muscle rectum
34 chr6:161431600-161434600 Enhancers Colon Smooth Muscle Colon
35 chr6:161431800-161433200 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr6:161431800-161433200 Enhancers NHLF lung
37 chr6:161431800-161433400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
38 chr6:161431800-161433400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr6:161431800-161433400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr6:161431800-161433400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr6:161431800-161433400 Enhancers Brain Angular Gyrus brain
42 chr6:161431800-161433400 Enhancers Duodenum Smooth Muscle Duodenum
43 chr6:161431800-161433400 Enhancers Fetal Lung lung
44 chr6:161431800-161434000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:161431800-161434000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:161431800-161434000 Enhancers Brain Hippocampus Middle brain
47 chr6:161431800-161434000 Enhancers Brain Substantia Nigra brain
48 chr6:161431800-161434800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr6:161432000-161433200 Enhancers Colonic Mucosa Colon
50 chr6:161432000-161433200 Enhancers Fetal Heart heart

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Last update: Aug 31, 2015