The 2.0 version of rSNPBase

Variant report

Variant rs6868057
Chromosome Location chr5:118708880-118708881
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118700200-118713800 Weak transcription H9 Cell Line embryonic stem cell
2 chr5:118702200-118710200 Weak transcription Fetal Lung lung
3 chr5:118702800-118710800 Weak transcription Left Ventricle heart
4 chr5:118702800-118713400 Weak transcription Aorta Aorta
5 chr5:118702800-118713400 Weak transcription Fetal Stomach stomach
6 chr5:118702800-118713600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr5:118702800-118714400 Weak transcription Placenta Placenta
8 chr5:118702800-118715000 Weak transcription Stomach Smooth Muscle stomach
9 chr5:118702800-118715400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:118702800-118720000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr5:118702800-118720800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr5:118702800-118722400 Weak transcription Spleen Spleen
13 chr5:118702800-118723800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr5:118702800-118736000 Weak transcription Fetal Muscle Leg muscle
15 chr5:118703000-118713000 Weak transcription Duodenum Mucosa Duodenum
16 chr5:118703800-118714000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr5:118704400-118709200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:118704400-118722800 Weak transcription HMEC breast
19 chr5:118704400-118728400 Weak transcription Hela-S3 cervix
20 chr5:118704600-118714200 Weak transcription Adipose Nuclei Adipose
21 chr5:118704600-118723400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:118705000-118711200 Genic enhancers Primary B cells from peripheral blood blood
23 chr5:118705600-118711800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr5:118705800-118714400 Weak transcription Thymus Thymus
25 chr5:118706000-118713400 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr5:118706400-118709000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr5:118706400-118720600 Weak transcription Small Intestine intestine
28 chr5:118706600-118722400 Weak transcription Primary monocytes fromperipheralblood blood
29 chr5:118706800-118712400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr5:118706800-118713600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr5:118706800-118713800 Weak transcription Fetal Heart heart
32 chr5:118706800-118717800 Weak transcription Primary neutrophils fromperipheralblood blood
33 chr5:118707200-118709000 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr5:118707200-118709400 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr5:118707200-118713200 Genic enhancers Primary T helper cells PMA-I stimulated --
36 chr5:118707200-118713400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr5:118707200-118713400 Weak transcription Osteobl bone
38 chr5:118707200-118713800 Weak transcription HSMMtube muscle
39 chr5:118707200-118713800 Weak transcription K562 blood
40 chr5:118707400-118713400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr5:118707400-118718600 Genic enhancers Primary T cells fromperipheralblood blood
42 chr5:118707600-118715000 Weak transcription Primary hematopoietic stem cells blood
43 chr5:118707600-118715000 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr5:118707600-118715200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr5:118707600-118754600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr5:118707800-118716800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:118708200-118711000 Strong transcription Fetal Thymus thymus
48 chr5:118708600-118709400 Genic enhancers Primary T cells from cord blood blood
49 chr5:118708600-118710400 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr5:118708800-118709400 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015