Variant report

Variant rs6869164
Chromosome Location chr5:54014442-54014443
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:54010600-54015600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:54010600-54016600 Weak transcription Aorta Aorta
3 chr5:54011000-54014600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:54011400-54014600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr5:54011600-54015000 Weak transcription Right Ventricle heart
6 chr5:54011600-54016400 Weak transcription Gastric stomach
7 chr5:54013200-54020800 Enhancers Fetal Heart heart
8 chr5:54013400-54014600 Enhancers GM12878-XiMat blood
9 chr5:54013800-54017600 Enhancers Fetal Brain Male brain
10 chr5:54014200-54015600 Enhancers Fetal Brain Female brain
11 chr5:54014200-54016000 Enhancers Cortex derived primary cultured neurospheres brain
12 chr5:54014200-54016400 Enhancers Fetal Lung lung
13 chr5:54014200-54016600 Enhancers Fetal Muscle Trunk muscle
14 chr5:54014400-54014600 Enhancers Right Atrium heart
15 chr5:54014400-54014600 Enhancers Monocytes-CD14+_RO01746 blood
16 chr5:54014400-54014800 Enhancers Brain Substantia Nigra brain
17 chr5:54014400-54015000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:54014400-54015000 Enhancers Esophagus oesophagus
19 chr5:54014400-54015400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:54014400-54015400 Enhancers Osteobl bone
21 chr5:54014400-54015600 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr5:54014400-54015600 Enhancers Brain Angular Gyrus brain
23 chr5:54014400-54015600 Enhancers Brain Hippocampus Middle brain
24 chr5:54014400-54015600 Enhancers Brain Inferior Temporal Lobe brain
25 chr5:54014400-54015800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr5:54014400-54015800 Enhancers Brain Anterior Caudate brain
27 chr5:54014400-54015800 Enhancers Brain Cingulate Gyrus brain
28 chr5:54014400-54015800 Enhancers Pancreas Pancrea
29 chr5:54014400-54016000 Enhancers ES-I3 Cell Line embryonic stem cell
30 chr5:54014400-54016000 Enhancers HUES6 Cell Line embryonic stem cell
31 chr5:54014400-54016000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr5:54014400-54016000 Enhancers Adipose Nuclei Adipose
33 chr5:54014400-54016000 Enhancers Ovary ovary
34 chr5:54014400-54016000 Enhancers HMEC breast
35 chr5:54014400-54016200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr5:54014400-54016200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
37 chr5:54014400-54016600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr5:54014400-54016600 Enhancers Left Ventricle heart
39 chr5:54014400-54016600 Enhancers NHDF-Ad bronchial
40 chr5:54014400-54016800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr5:54014400-54016800 Enhancers Fetal Stomach stomach
42 chr5:54014400-54016800 Enhancers NH-A brain
43 chr5:54014400-54016800 Enhancers NHLF lung
44 chr5:54014400-54017000 Enhancers Fetal Muscle Leg muscle

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