Variant report

Variant rs6871
Chromosome Location chr5:128449644-128449645
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:128431400-128450600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr5:128431400-128457400 Weak transcription Lung lung
3 chr5:128431600-128450400 Weak transcription Placenta Placenta
4 chr5:128431600-128450400 Weak transcription HSMM muscle
5 chr5:128431600-128454200 Weak transcription Primary monocytes fromperipheralblood blood
6 chr5:128432200-128450400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:128432200-128454600 Weak transcription Aorta Aorta
8 chr5:128432400-128450400 Weak transcription Brain Angular Gyrus brain
9 chr5:128433400-128453800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr5:128434000-128455600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr5:128434000-128458400 Weak transcription Esophagus oesophagus
12 chr5:128434400-128454200 Weak transcription Colonic Mucosa Colon
13 chr5:128434400-128461800 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr5:128434800-128461600 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr5:128435200-128450400 Weak transcription HUVEC blood vessel
16 chr5:128435200-128452800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr5:128435200-128453000 Weak transcription HUES6 Cell Line embryonic stem cell
18 chr5:128435200-128462200 Weak transcription Pancreas Pancrea
19 chr5:128435600-128453200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr5:128439600-128456200 Weak transcription Spleen Spleen
21 chr5:128440000-128452800 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr5:128440600-128452800 Weak transcription H9 Cell Line embryonic stem cell
23 chr5:128442200-128451000 Strong transcription Primary T cells from cord blood blood
24 chr5:128442800-128450400 Weak transcription Hela-S3 cervix
25 chr5:128442800-128451800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr5:128443000-128459800 Weak transcription Fetal Kidney kidney
27 chr5:128443200-128450400 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr5:128443200-128450800 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr5:128443600-128450200 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr5:128443600-128450400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr5:128443600-128454400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr5:128443600-128454400 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr5:128443800-128452600 Weak transcription Brain Inferior Temporal Lobe brain
34 chr5:128444000-128450400 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr5:128444000-128453600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr5:128444000-128453800 Weak transcription Thymus Thymus
37 chr5:128444000-128454200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr5:128444000-128455000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr5:128444000-128460200 Weak transcription Primary B cells from peripheral blood blood
40 chr5:128444000-128461600 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr5:128444000-128461600 Weak transcription Rectal Smooth Muscle rectum
42 chr5:128444000-128462000 Weak transcription Primary hematopoietic stem cells blood
43 chr5:128444000-128462400 Weak transcription Gastric stomach
44 chr5:128444200-128451200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr5:128444400-128450000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr5:128444600-128461600 Weak transcription Fetal Intestine Small intestine
47 chr5:128445000-128455400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr5:128445200-128452800 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr5:128445400-128452000 Weak transcription Fetal Thymus thymus
50 chr5:128446000-128452200 Weak transcription Primary T helper naive cells fromperipheralblood blood

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