The 2.0 version of rSNPBase

Variant report

Variant rs6893952
Chromosome Location chr5:115668262-115668263
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115643200-115669800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr5:115644400-115671800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr5:115649000-115692800 Weak transcription Fetal Heart heart
4 chr5:115653600-115670400 Weak transcription Right Ventricle heart
5 chr5:115654600-115669600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr5:115655400-115669800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:115659200-115669600 Weak transcription Fetal Kidney kidney
8 chr5:115663200-115671000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr5:115664600-115671600 Weak transcription Stomach Smooth Muscle stomach
10 chr5:115664800-115669600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr5:115665200-115671800 Weak transcription Ovary ovary
12 chr5:115665400-115669400 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr5:115665400-115669600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr5:115665400-115669600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr5:115665400-115669600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr5:115665400-115669600 Weak transcription Aorta Aorta
17 chr5:115665400-115669600 Weak transcription Pancreas Pancrea
18 chr5:115665400-115669600 Weak transcription Thymus Thymus
19 chr5:115665600-115669600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:115665600-115669600 Weak transcription Esophagus oesophagus
21 chr5:115665600-115669600 Weak transcription Fetal Muscle Trunk muscle
22 chr5:115665600-115669600 Weak transcription Dnd41 blood
23 chr5:115665600-115670400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:115665800-115671000 Weak transcription Primary T cells from cord blood blood
25 chr5:115666400-115668800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr5:115666400-115669200 Weak transcription Primary B cells from cord blood blood
27 chr5:115666400-115669600 Weak transcription Adipose Nuclei Adipose
28 chr5:115666400-115669800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr5:115666400-115670000 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr5:115666600-115669600 Weak transcription Liver Liver
31 chr5:115666600-115669800 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr5:115666800-115668800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr5:115666800-115669200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr5:115666800-115669800 Weak transcription Fetal Lung lung
35 chr5:115666800-115683600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr5:115667000-115668800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr5:115667400-115668800 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015