Variant report

Variant	rs6900743
Chromosome Location	chr6:133803287-133803288
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11963580	1.00[EUR][1000 genomes]
rs11969724	1.00[EUR][1000 genomes]
rs12663242	0.80[AFR][1000 genomes]
rs3777876	1.00[EUR][1000 genomes]
rs3777881	1.00[EUR][1000 genomes]
rs3822936	0.87[AFR][1000 genomes]
rs58073338	0.88[AFR][1000 genomes]
rs59342392	0.88[AFR][1000 genomes]
rs6899314	0.85[YRI][hapmap];0.87[AFR][1000 genomes]
rs6905892	0.88[YRI][hapmap];0.89[AFR][1000 genomes]
rs6921578	0.89[YRI][hapmap];0.87[AFR][1000 genomes]
rs6942295	0.86[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73544971	0.88[AFR][1000 genomes]
rs73544998	0.82[AFR][1000 genomes]
rs7750265	0.96[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7765616	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7773315	0.89[YRI][hapmap];0.87[AFR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133765800-133822000	Weak transcription	Psoas Muscle	Psoas
2	chr6:133782000-133811600	Weak transcription	A549	lung
3	chr6:133782400-133806400	Weak transcription	Fetal Muscle Leg	muscle
4	chr6:133784000-133813000	Weak transcription	HSMMtube	muscle
5	chr6:133786600-133812400	Weak transcription	Fetal Kidney	kidney
6	chr6:133786800-133807400	Weak transcription	Fetal Muscle Trunk	muscle
7	chr6:133787400-133822800	Weak transcription	Fetal Lung	lung
8	chr6:133790800-133807800	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr6:133790800-133821600	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr6:133795000-133808400	Weak transcription	Left Ventricle	heart
11	chr6:133801800-133805400	Weak transcription	Hela-S3	cervix
12	chr6:133802800-133804600	Weak transcription	Cortex derived primary cultured neurospheres	brain
13	chr6:133802800-133807400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr6:133803200-133809600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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