The 2.0 version of rSNPBase

Variant report

Variant rs6904984
Chromosome Location chr6:119524025-119524026
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119491800-119531200 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr6:119492200-119527800 Weak transcription NHEK skin
3 chr6:119492400-119524200 Weak transcription Fetal Stomach stomach
4 chr6:119494600-119547400 Weak transcription Esophagus oesophagus
5 chr6:119494800-119526200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr6:119497000-119524400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr6:119497000-119524400 Weak transcription Small Intestine intestine
8 chr6:119498000-119536600 Weak transcription Fetal Heart heart
9 chr6:119498200-119527400 Strong transcription Liver Liver
10 chr6:119498600-119531400 Strong transcription HepG2 liver
11 chr6:119498800-119526800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr6:119499400-119525400 Weak transcription NH-A brain
13 chr6:119499800-119524400 Weak transcription Right Ventricle heart
14 chr6:119501600-119524200 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr6:119502400-119525800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr6:119502600-119526800 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr6:119503400-119539800 Weak transcription Gastric stomach
18 chr6:119503800-119524200 Weak transcription Rectal Smooth Muscle rectum
19 chr6:119505200-119527400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr6:119506800-119530800 Weak transcription Stomach Mucosa stomach
21 chr6:119507800-119525000 Weak transcription Osteobl bone
22 chr6:119508200-119524400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr6:119509800-119530000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:119510000-119526200 Weak transcription Brain Angular Gyrus brain
25 chr6:119510000-119529800 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr6:119511200-119530000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr6:119511400-119529800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:119511400-119530800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr6:119511800-119524200 Weak transcription Fetal Muscle Leg muscle
30 chr6:119512000-119525000 Weak transcription Colonic Mucosa Colon
31 chr6:119515200-119529200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr6:119516200-119532800 Strong transcription K562 blood
33 chr6:119516600-119524200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr6:119516600-119527600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr6:119516600-119528800 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr6:119516800-119524400 Weak transcription Fetal Muscle Trunk muscle
37 chr6:119517400-119528000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr6:119518000-119524400 Weak transcription NHDF-Ad bronchial
39 chr6:119518600-119524400 Weak transcription Aorta Aorta
40 chr6:119518800-119527800 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr6:119519000-119527400 Weak transcription Thymus Thymus
42 chr6:119519200-119527000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr6:119519200-119527400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr6:119519200-119527600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:119519200-119558400 Weak transcription Muscle Satellite Cultured Cells --
46 chr6:119519400-119524400 Weak transcription Pancreas Pancrea
47 chr6:119519800-119526000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr6:119519800-119527400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr6:119520400-119526400 Strong transcription Primary hematopoietic stem cells blood
50 chr6:119520600-119524800 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015