The 2.0 version of rSNPBase

Variant report

Variant rs970181
Chromosome Location chr6:119527394-119527395
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119491800-119531200 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr6:119492200-119527800 Weak transcription NHEK skin
3 chr6:119494600-119547400 Weak transcription Esophagus oesophagus
4 chr6:119498000-119536600 Weak transcription Fetal Heart heart
5 chr6:119498200-119527400 Strong transcription Liver Liver
6 chr6:119498600-119531400 Strong transcription HepG2 liver
7 chr6:119503400-119539800 Weak transcription Gastric stomach
8 chr6:119505200-119527400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr6:119506800-119530800 Weak transcription Stomach Mucosa stomach
10 chr6:119509800-119530000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr6:119510000-119529800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr6:119511200-119530000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr6:119511400-119529800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:119511400-119530800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr6:119515200-119529200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr6:119516200-119532800 Strong transcription K562 blood
17 chr6:119516600-119527600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr6:119516600-119528800 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr6:119517400-119528000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:119518800-119527800 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr6:119519000-119527400 Weak transcription Thymus Thymus
22 chr6:119519200-119527400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:119519200-119527600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr6:119519200-119558400 Weak transcription Muscle Satellite Cultured Cells --
25 chr6:119519800-119527400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:119524200-119532000 Weak transcription Fetal Brain Male brain
27 chr6:119524600-119529800 Weak transcription Fetal Kidney kidney
28 chr6:119524800-119529600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr6:119524800-119537000 Weak transcription Pancreas Pancrea
30 chr6:119524800-119539000 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr6:119524800-119558400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr6:119525000-119528200 Weak transcription Fetal Thymus thymus
33 chr6:119525000-119535200 Weak transcription Ovary ovary
34 chr6:119525200-119529000 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr6:119525200-119534000 Weak transcription Primary T cells from cord blood blood
36 chr6:119525400-119528400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr6:119525400-119528800 Weak transcription Fetal Stomach stomach
38 chr6:119525400-119529600 Weak transcription Colon Smooth Muscle Colon
39 chr6:119525400-119530200 Weak transcription Dnd41 blood
40 chr6:119525400-119531200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr6:119525400-119531200 Weak transcription NHLF lung
42 chr6:119525400-119533400 Weak transcription Rectal Smooth Muscle rectum
43 chr6:119525400-119537000 Weak transcription Right Ventricle heart
44 chr6:119525400-119537400 Weak transcription Brain Anterior Caudate brain
45 chr6:119525400-119548600 Weak transcription Aorta Aorta
46 chr6:119525400-119556000 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr6:119525400-119558400 Weak transcription Small Intestine intestine
48 chr6:119525600-119527400 Weak transcription Primary B cells from peripheral blood blood
49 chr6:119525800-119527400 Weak transcription Primary B cells from cord blood blood
50 chr6:119525800-119533400 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015