The 2.0 version of rSNPBase

Variant report

Variant rs6905689
Chromosome Location chr6:45433614-45433615
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:45407200-45462000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:45416400-45440400 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr6:45419200-45456200 Weak transcription Primary T cells fromperipheralblood blood
4 chr6:45422000-45441200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr6:45422000-45445000 Weak transcription Duodenum Mucosa Duodenum
6 chr6:45422200-45440000 Weak transcription Brain Angular Gyrus brain
7 chr6:45422400-45438200 Weak transcription Primary monocytes fromperipheralblood blood
8 chr6:45422600-45437200 Weak transcription NHDF-Ad bronchial
9 chr6:45422600-45439800 Weak transcription NHLF lung
10 chr6:45423000-45454400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr6:45423400-45434600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr6:45425600-45444000 Weak transcription Fetal Thymus thymus
13 chr6:45426800-45444200 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr6:45429000-45440600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:45429400-45438000 Weak transcription NH-A brain
16 chr6:45429400-45445400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:45429600-45437800 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr6:45429600-45444800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr6:45429600-45444800 Weak transcription NHEK skin
20 chr6:45429800-45445000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:45429800-45445400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr6:45430000-45444600 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr6:45430200-45444600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr6:45430200-45445400 Weak transcription Primary T cells from cord blood blood
25 chr6:45430200-45445800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr6:45430600-45436200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr6:45430800-45434200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr6:45430800-45434200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr6:45430800-45434600 Weak transcription Dnd41 blood
30 chr6:45430800-45435200 Weak transcription Left Ventricle heart
31 chr6:45430800-45436400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr6:45431000-45434600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr6:45431200-45440000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr6:45432000-45441200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr6:45432200-45447800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr6:45432600-45434800 Weak transcription K562 blood
37 chr6:45432800-45434400 Weak transcription Muscle Satellite Cultured Cells --
38 chr6:45432800-45436600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr6:45433000-45434200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr6:45433000-45434200 Weak transcription HSMM muscle
41 chr6:45433000-45434200 Weak transcription Osteobl bone
42 chr6:45433000-45435200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr6:45433000-45440000 Weak transcription HSMMtube muscle
44 chr6:45433000-45440400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr6:45433200-45438000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr6:45433400-45440000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr6:45433400-45440000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr6:45433600-45435000 Strong transcription Primary hematopoietic stem cells blood
49 chr6:45433600-45440000 Strong transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015