Variant report

Variant rs6905927
Chromosome Location chr6:53688943-53688944
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:53670800-53693200 Weak transcription H9 Cell Line embryonic stem cell
2 chr6:53676200-53697800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr6:53678600-53692200 Weak transcription Esophagus oesophagus
4 chr6:53680400-53690000 Weak transcription Fetal Intestine Small intestine
5 chr6:53680400-53690200 Weak transcription Fetal Thymus thymus
6 chr6:53680400-53691800 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr6:53680400-53692400 Weak transcription Pancreas Pancrea
8 chr6:53680400-53721600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr6:53680600-53689400 Weak transcription Fetal Intestine Large intestine
10 chr6:53680600-53694400 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr6:53680800-53689600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr6:53681200-53689800 Weak transcription Osteobl bone
13 chr6:53682600-53689400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr6:53683600-53689800 Weak transcription Dnd41 blood
15 chr6:53684000-53691400 Weak transcription Hela-S3 cervix
16 chr6:53684000-53692400 Weak transcription Left Ventricle heart
17 chr6:53684000-53694000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr6:53684000-53710200 Weak transcription Primary T cells from cord blood blood
19 chr6:53684200-53689400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr6:53684600-53690600 Weak transcription Muscle Satellite Cultured Cells --
21 chr6:53684600-53697000 Enhancers Brain Substantia Nigra brain
22 chr6:53684800-53689800 Weak transcription HMEC breast
23 chr6:53685000-53689600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:53685000-53689800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr6:53685000-53690200 Weak transcription NHEK skin
26 chr6:53686000-53690400 Weak transcription Gastric stomach
27 chr6:53687200-53692400 Weak transcription Thymus Thymus
28 chr6:53687400-53689400 Weak transcription Stomach Mucosa stomach
29 chr6:53687400-53690400 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr6:53687400-53691600 Weak transcription Right Atrium heart
31 chr6:53687600-53689200 Weak transcription Colon Smooth Muscle Colon
32 chr6:53687600-53692400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr6:53687600-53693000 Weak transcription Stomach Smooth Muscle stomach
34 chr6:53687600-53702000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr6:53687800-53689600 Weak transcription HepG2 liver
36 chr6:53687800-53689800 Weak transcription Rectal Smooth Muscle rectum
37 chr6:53687800-53690800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:53687800-53691200 Weak transcription H1 Cell Line embryonic stem cell
39 chr6:53687800-53692200 Weak transcription HSMM muscle
40 chr6:53687800-53692800 Weak transcription HSMMtube muscle
41 chr6:53688000-53689200 Weak transcription Brain Anterior Caudate brain
42 chr6:53688000-53689600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr6:53688000-53690200 Weak transcription Brain Inferior Temporal Lobe brain
44 chr6:53688000-53690400 Weak transcription Aorta Aorta
45 chr6:53688000-53692000 Weak transcription Brain Angular Gyrus brain
46 chr6:53688000-53692400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr6:53688000-53694600 Weak transcription Fetal Muscle Leg muscle
48 chr6:53688200-53689600 Weak transcription Brain Hippocampus Middle brain
49 chr6:53688200-53690000 Weak transcription Brain Cingulate Gyrus brain
50 chr6:53688400-53689400 Weak transcription Pancreatic Islets Pancreatic Islet

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