Variant report
Variant | rs6905927 |
---|---|
Chromosome Location | chr6:53688943-53688944 |
allele | G/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:53670800-53693200 | Weak transcription | H9 Cell Line | embryonic stem cell |
2 | chr6:53676200-53697800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
3 | chr6:53678600-53692200 | Weak transcription | Esophagus | oesophagus |
4 | chr6:53680400-53690000 | Weak transcription | Fetal Intestine Small | intestine |
5 | chr6:53680400-53690200 | Weak transcription | Fetal Thymus | thymus |
6 | chr6:53680400-53691800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
7 | chr6:53680400-53692400 | Weak transcription | Pancreas | Pancrea |
8 | chr6:53680400-53721600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
9 | chr6:53680600-53689400 | Weak transcription | Fetal Intestine Large | intestine |
10 | chr6:53680600-53694400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
11 | chr6:53680800-53689600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
12 | chr6:53681200-53689800 | Weak transcription | Osteobl | bone |
13 | chr6:53682600-53689400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
14 | chr6:53683600-53689800 | Weak transcription | Dnd41 | blood |
15 | chr6:53684000-53691400 | Weak transcription | Hela-S3 | cervix |
16 | chr6:53684000-53692400 | Weak transcription | Left Ventricle | heart |
17 | chr6:53684000-53694000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
18 | chr6:53684000-53710200 | Weak transcription | Primary T cells from cord blood | blood |
19 | chr6:53684200-53689400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
20 | chr6:53684600-53690600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
21 | chr6:53684600-53697000 | Enhancers | Brain Substantia Nigra | brain |
22 | chr6:53684800-53689800 | Weak transcription | HMEC | breast |
23 | chr6:53685000-53689600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
24 | chr6:53685000-53689800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
25 | chr6:53685000-53690200 | Weak transcription | NHEK | skin |
26 | chr6:53686000-53690400 | Weak transcription | Gastric | stomach |
27 | chr6:53687200-53692400 | Weak transcription | Thymus | Thymus |
28 | chr6:53687400-53689400 | Weak transcription | Stomach Mucosa | stomach |
29 | chr6:53687400-53690400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
30 | chr6:53687400-53691600 | Weak transcription | Right Atrium | heart |
31 | chr6:53687600-53689200 | Weak transcription | Colon Smooth Muscle | Colon |
32 | chr6:53687600-53692400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
33 | chr6:53687600-53693000 | Weak transcription | Stomach Smooth Muscle | stomach |
34 | chr6:53687600-53702000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
35 | chr6:53687800-53689600 | Weak transcription | HepG2 | liver |
36 | chr6:53687800-53689800 | Weak transcription | Rectal Smooth Muscle | rectum |
37 | chr6:53687800-53690800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
38 | chr6:53687800-53691200 | Weak transcription | H1 Cell Line | embryonic stem cell |
39 | chr6:53687800-53692200 | Weak transcription | HSMM | muscle |
40 | chr6:53687800-53692800 | Weak transcription | HSMMtube | muscle |
41 | chr6:53688000-53689200 | Weak transcription | Brain Anterior Caudate | brain |
42 | chr6:53688000-53689600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
43 | chr6:53688000-53690200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
44 | chr6:53688000-53690400 | Weak transcription | Aorta | Aorta |
45 | chr6:53688000-53692000 | Weak transcription | Brain Angular Gyrus | brain |
46 | chr6:53688000-53692400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
47 | chr6:53688000-53694600 | Weak transcription | Fetal Muscle Leg | muscle |
48 | chr6:53688200-53689600 | Weak transcription | Brain Hippocampus Middle | brain |
49 | chr6:53688200-53690000 | Weak transcription | Brain Cingulate Gyrus | brain |
50 | chr6:53688400-53689400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |