Variant report

Variant	rs6909901
Chromosome Location	chr6:87814123-87814124
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs6910649	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024751	chr6:87433199-87908721	Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:87803600-87816000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:87809000-87814200	Enhancers	Fetal Heart	heart
3	chr6:87812400-87814200	Weak transcription	Primary hematopoietic stem cells	blood
4	chr6:87812600-87814400	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr6:87813800-87815400	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr6:87814000-87814200	Enhancers	GM12878-XiMat	blood
7	chr6:87814000-87814600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr6:87814000-87814800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr6:87814000-87815000	Enhancers	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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