Variant report

Variant	rs6911254
Chromosome Location	chr6:44647049-44647050
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:44646457..44648183-chr6:44695917..44698549,2	MCF-7	breast:
2	chr6:44644937..44647100-chr6:44647799..44650476,2	MCF-7	breast:

rs_ID	r²[population]
rs12661936	0.83[ASN][1000 genomes]
rs2817118	0.83[ASN][1000 genomes]
rs489448	0.83[ASN][1000 genomes]

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44636400-44647400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:44636400-44649200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr6:44636600-44647400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr6:44637400-44647400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr6:44639200-44647600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr6:44639400-44647400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr6:44641000-44647400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr6:44641000-44647400	Weak transcription	HSMMtube	muscle
9	chr6:44643200-44647400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr6:44644000-44647400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr6:44644400-44652800	Weak transcription	HMEC	breast
12	chr6:44644600-44649200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr6:44644800-44647400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr6:44644800-44647600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr6:44644800-44649000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr6:44645000-44647200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr6:44645000-44647400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr6:44645000-44647400	Weak transcription	NHEK	skin
19	chr6:44645200-44647400	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr6:44645400-44647800	Weak transcription	HSMM	muscle
21	chr6:44646400-44647800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr6:44646600-44647800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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