Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10214499	0.88[AMR][1000 genomes]
rs11961580	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13201074	1.00[CHB][hapmap]
rs13202718	0.83[AMR][1000 genomes]
rs13202865	0.83[AMR][1000 genomes]
rs13204099	0.83[AMR][1000 genomes]
rs16867531	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1987276	1.00[CHB][hapmap]
rs2094595	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2573010	0.89[AMR][1000 genomes]
rs4354104	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs514510	0.86[AMR][1000 genomes]
rs56880395	0.83[AMR][1000 genomes]
rs6906920	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6922588	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9446121	0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9446122	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs9454766	0.83[AMR][1000 genomes]
rs9454770	0.83[AMR][1000 genomes]
rs9454771	0.86[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432919	chr6:69873179-70221322	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70146400-70147600	Weak transcription	Brain Germinal Matrix	brain

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