The 2.0 version of rSNPBase

Variant report

Variant rs6916982
Chromosome Location chr6:4038355-4038356
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:4022400-4043400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:4022600-4049400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:4023000-4038600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:4023000-4063600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr6:4023200-4043400 Weak transcription Aorta Aorta
6 chr6:4023200-4064000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr6:4023400-4038800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr6:4023400-4040600 Weak transcription Fetal Brain Male brain
9 chr6:4023400-4071600 Weak transcription Stomach Mucosa stomach
10 chr6:4023800-4067000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:4024200-4040200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr6:4024600-4040200 Weak transcription Esophagus oesophagus
13 chr6:4024600-4059200 Strong transcription Fetal Thymus thymus
14 chr6:4025200-4039200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:4027200-4058200 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr6:4027400-4039600 Weak transcription Fetal Heart heart
17 chr6:4027400-4039600 Weak transcription Gastric stomach
18 chr6:4027800-4040800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr6:4027800-4041600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr6:4028200-4038800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:4028600-4039000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:4028800-4038600 Weak transcription Ovary ovary
23 chr6:4028800-4038600 Weak transcription Psoas Muscle Psoas
24 chr6:4028800-4038800 Weak transcription Brain Hippocampus Middle brain
25 chr6:4028800-4039600 Weak transcription Brain Angular Gyrus brain
26 chr6:4028800-4042000 Weak transcription Right Ventricle heart
27 chr6:4029000-4039200 Weak transcription Brain Substantia Nigra brain
28 chr6:4029200-4040200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr6:4030000-4040600 Weak transcription Placenta Amnion Placenta Amnion
30 chr6:4030600-4039600 Weak transcription Pancreas Pancrea
31 chr6:4030600-4065800 Strong transcription iPS-18 Cell Line embryonic stem cell
32 chr6:4030800-4059000 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr6:4030800-4066600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr6:4031000-4059200 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr6:4031000-4066400 Strong transcription HUES48 Cell Line embryonic stem cell
36 chr6:4031200-4066600 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr6:4031400-4040000 Weak transcription Small Intestine intestine
38 chr6:4033000-4038400 Weak transcription Colonic Mucosa Colon
39 chr6:4033000-4038800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr6:4033400-4039400 Weak transcription HMEC breast
41 chr6:4033400-4055200 Strong transcription K562 blood
42 chr6:4033600-4038800 Weak transcription HSMM muscle
43 chr6:4033800-4054400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:4034000-4066800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr6:4034400-4040200 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr6:4034600-4038800 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr6:4034600-4040000 Weak transcription Colon Smooth Muscle Colon
48 chr6:4035600-4040000 Strong transcription NHLF lung
49 chr6:4035600-4042400 Strong transcription Fetal Intestine Small intestine
50 chr6:4035600-4045800 Strong transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015