The 2.0 version of rSNPBase

Variant report

Variant rs941443
Chromosome Location chr6:4028252-4028253
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:4022400-4028400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:4022400-4043400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:4022600-4049400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:4023000-4028400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr6:4023000-4028400 Weak transcription Ovary ovary
6 chr6:4023000-4032000 Weak transcription Fetal Muscle Trunk muscle
7 chr6:4023000-4038600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:4023000-4063600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr6:4023200-4028400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr6:4023200-4031800 Weak transcription Placenta Placenta
11 chr6:4023200-4034000 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr6:4023200-4035600 Weak transcription H9 Cell Line embryonic stem cell
13 chr6:4023200-4043400 Weak transcription Aorta Aorta
14 chr6:4023200-4064000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr6:4023400-4029200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr6:4023400-4038800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr6:4023400-4040600 Weak transcription Fetal Brain Male brain
18 chr6:4023400-4071600 Weak transcription Stomach Mucosa stomach
19 chr6:4023600-4028400 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr6:4023600-4031000 Weak transcription H1 Cell Line embryonic stem cell
21 chr6:4023800-4030600 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr6:4023800-4031200 Weak transcription HUVEC blood vessel
23 chr6:4023800-4032000 Weak transcription Fetal Lung lung
24 chr6:4023800-4032200 Weak transcription Colonic Mucosa Colon
25 chr6:4023800-4033600 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr6:4023800-4037400 Weak transcription Fetal Brain Female brain
27 chr6:4023800-4037600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr6:4023800-4067000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:4024000-4028400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr6:4024000-4031400 Weak transcription Muscle Satellite Cultured Cells --
31 chr6:4024000-4031600 Weak transcription NH-A brain
32 chr6:4024000-4031800 Weak transcription HMEC breast
33 chr6:4024000-4035600 Weak transcription NHLF lung
34 chr6:4024000-4036400 Weak transcription Stomach Smooth Muscle stomach
35 chr6:4024000-4037600 Weak transcription HSMMtube muscle
36 chr6:4024200-4028400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr6:4024200-4031000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr6:4024200-4031400 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr6:4024200-4037000 Weak transcription Right Atrium heart
40 chr6:4024200-4040200 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr6:4024400-4028400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr6:4024400-4028400 Weak transcription Brain Hippocampus Middle brain
43 chr6:4024400-4028400 Weak transcription Fetal Intestine Small intestine
44 chr6:4024400-4029200 Genic enhancers HepG2 liver
45 chr6:4024400-4031800 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr6:4024400-4035800 Weak transcription Thymus Thymus
47 chr6:4024600-4028400 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr6:4024600-4028400 Weak transcription Fetal Intestine Large intestine
49 chr6:4024600-4031400 Weak transcription Duodenum Mucosa Duodenum
50 chr6:4024600-4031400 Weak transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015