The 2.0 version of rSNPBase

Variant report

Variant rs6930200
Chromosome Location chr6:119223608-119223609
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119216600-119224400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:119216600-119233800 Weak transcription Lung lung
3 chr6:119216600-119236600 Weak transcription Gastric stomach
4 chr6:119216600-119243800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:119216800-119230600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr6:119216800-119232400 Weak transcription Colonic Mucosa Colon
7 chr6:119216800-119232600 Weak transcription Placenta Amnion Placenta Amnion
8 chr6:119216800-119233200 Weak transcription Aorta Aorta
9 chr6:119216800-119235800 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr6:119217000-119225400 Weak transcription Stomach Smooth Muscle stomach
11 chr6:119217000-119242200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr6:119217800-119224200 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr6:119217800-119224400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr6:119217800-119224600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr6:119217800-119228400 Weak transcription Rectal Smooth Muscle rectum
16 chr6:119217800-119236200 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr6:119218200-119229200 Weak transcription NHLF lung
18 chr6:119218600-119247000 Strong transcription Fetal Thymus thymus
19 chr6:119218800-119237200 Strong transcription Primary hematopoietic stem cells blood
20 chr6:119219200-119225400 Weak transcription Small Intestine intestine
21 chr6:119219200-119254000 Strong transcription Monocytes-CD14+_RO01746 blood
22 chr6:119219200-119254400 Strong transcription Placenta Placenta
23 chr6:119219400-119223800 Weak transcription Colon Smooth Muscle Colon
24 chr6:119219600-119223800 Strong transcription HSMM muscle
25 chr6:119219600-119253000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr6:119219600-119253800 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr6:119219800-119224200 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr6:119220000-119224200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:119220400-119226400 Strong transcription Rectal Mucosa Donor 29 rectum
30 chr6:119220600-119224400 Weak transcription Left Ventricle heart
31 chr6:119220600-119225400 Enhancers Primary T helper naive cells fromperipheralblood blood
32 chr6:119220600-119226200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr6:119220600-119227000 Weak transcription Spleen Spleen
34 chr6:119220600-119233200 Weak transcription Pancreas Pancrea
35 chr6:119220600-119234400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr6:119220600-119236600 Weak transcription Esophagus oesophagus
37 chr6:119220800-119224200 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr6:119220800-119224400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr6:119220800-119225400 Weak transcription H9 Cell Line embryonic stem cell
40 chr6:119220800-119233000 Weak transcription Fetal Intestine Small intestine
41 chr6:119220800-119233600 Weak transcription Right Ventricle heart
42 chr6:119221000-119228000 Weak transcription Hela-S3 cervix
43 chr6:119221200-119223800 Weak transcription HMEC breast
44 chr6:119221200-119224200 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr6:119221200-119224800 Genic enhancers NH-A brain
46 chr6:119221200-119255800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr6:119221400-119223800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr6:119221400-119223800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr6:119221400-119224600 Weak transcription Fetal Brain Male brain
50 chr6:119221400-119246800 Strong transcription HUES48 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015