Variant report

Variant	rs6937403
Chromosome Location	chr6:15085780-15085781
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1964834	1.00[AMR][1000 genomes]
rs9464746	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830593	chr6:15049636-15244190	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15077000-15090000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr6:15078400-15086600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
3	chr6:15078400-15086800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr6:15078800-15087400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr6:15080000-15089400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr6:15080200-15086600	Weak transcription	Duodenum Mucosa	Duodenum
7	chr6:15080400-15086800	Weak transcription	Right Atrium	heart
8	chr6:15082000-15086800	Weak transcription	Stomach Mucosa	stomach
9	chr6:15082200-15086600	Weak transcription	Fetal Intestine Small	intestine
10	chr6:15083200-15086800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr6:15083800-15086200	Enhancers	K562	blood
12	chr6:15083800-15088200	Enhancers	Primary neutrophils fromperipheralblood	blood
13	chr6:15083800-15093000	Enhancers	Primary monocytes fromperipheralblood	blood
14	chr6:15084000-15086800	Enhancers	Monocytes-CD14+_RO01746	blood
15	chr6:15085400-15086600	Weak transcription	Fetal Intestine Large	intestine
16	chr6:15085400-15086800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr6:15085400-15087200	Weak transcription	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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