Variant report

Variant	rs6941056
Chromosome Location	chr6:143591821-143591822
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143587249..143590033-chr6:143590685..143593410,2	K562	blood:
2	chr6:143591577..143593463-chr6:143730935..143732577,2	K562	blood:

rs_ID	r²[population]
rs1570350	1.00[CEU][hapmap];0.90[JPT][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143569000-143592000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr6:143570800-143609200	Weak transcription	Fetal Intestine Large	intestine
3	chr6:143583400-143606000	Weak transcription	Fetal Intestine Small	intestine
4	chr6:143583800-143615400	Weak transcription	K562	blood
5	chr6:143585800-143592000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr6:143586800-143592000	Weak transcription	Rectal Smooth Muscle	rectum
7	chr6:143587000-143592000	Weak transcription	Colon Smooth Muscle	Colon
8	chr6:143587000-143592000	Weak transcription	Stomach Smooth Muscle	stomach
9	chr6:143587400-143592000	Weak transcription	HSMM	muscle
10	chr6:143589000-143607400	Weak transcription	Aorta	Aorta
11	chr6:143589600-143592000	Weak transcription	Right Atrium	heart
12	chr6:143590000-143593000	Enhancers	Fetal Heart	heart
13	chr6:143590400-143592000	Weak transcription	Left Ventricle	heart
14	chr6:143591200-143592400	Enhancers	Fetal Muscle Leg	muscle
15	chr6:143591200-143592600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:143591200-143592600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr6:143591200-143592600	Enhancers	Fetal Stomach	stomach
18	chr6:143591200-143592600	Enhancers	HMEC	breast
19	chr6:143591200-143592800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr6:143591200-143592800	Enhancers	NHLF	lung
21	chr6:143591200-143592800	Enhancers	Osteobl	bone
22	chr6:143591200-143593200	Enhancers	NHEK	skin
23	chr6:143591400-143592600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr6:143591400-143592600	Enhancers	Fetal Lung	lung
25	chr6:143591400-143592800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr6:143591400-143592800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr6:143591400-143593400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr6:143591400-143593600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr6:143591400-143605200	Weak transcription	Liver	Liver
30	chr6:143591800-143592200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr6:143591800-143592200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr6:143591800-143592200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr6:143591800-143592200	Enhancers	Adipose Nuclei	Adipose
34	chr6:143591800-143592200	Enhancers	Brain Hippocampus Middle	brain
35	chr6:143591800-143592200	Enhancers	Right Ventricle	heart
36	chr6:143591800-143592200	Flanking Active TSS	NHDF-Ad	bronchial
37	chr6:143591800-143592400	Enhancers	Brain Substantia Nigra	brain
38	chr6:143591800-143592400	Enhancers	Ovary	ovary
39	chr6:143591800-143592600	Enhancers	Fetal Brain Male	brain

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