Variant report

Variant	rs1570350
Chromosome Location	chr6:143592386-143592387
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143587249..143590033-chr6:143590685..143593410,2	K562	blood:
2	chr6:143591577..143593463-chr6:143730935..143732577,2	K562	blood:

rs_ID	r²[population]
rs1885649	0.86[ASW][hapmap]
rs6933721	0.86[ASW][hapmap]
rs6941056	1.00[CEU][hapmap];0.90[JPT][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9373387	0.86[ASW][hapmap]
rs9496542	0.86[ASW][hapmap]

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143570800-143609200	Weak transcription	Fetal Intestine Large	intestine
2	chr6:143583400-143606000	Weak transcription	Fetal Intestine Small	intestine
3	chr6:143583800-143615400	Weak transcription	K562	blood
4	chr6:143589000-143607400	Weak transcription	Aorta	Aorta
5	chr6:143590000-143593000	Enhancers	Fetal Heart	heart
6	chr6:143591200-143592400	Enhancers	Fetal Muscle Leg	muscle
7	chr6:143591200-143592600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr6:143591200-143592600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr6:143591200-143592600	Enhancers	Fetal Stomach	stomach
10	chr6:143591200-143592600	Enhancers	HMEC	breast
11	chr6:143591200-143592800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr6:143591200-143592800	Enhancers	NHLF	lung
13	chr6:143591200-143592800	Enhancers	Osteobl	bone
14	chr6:143591200-143593200	Enhancers	NHEK	skin
15	chr6:143591400-143592600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr6:143591400-143592600	Enhancers	Fetal Lung	lung
17	chr6:143591400-143592800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr6:143591400-143592800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr6:143591400-143593400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr6:143591400-143593600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr6:143591400-143605200	Weak transcription	Liver	Liver
22	chr6:143591800-143592400	Enhancers	Brain Substantia Nigra	brain
23	chr6:143591800-143592400	Enhancers	Ovary	ovary
24	chr6:143591800-143592600	Enhancers	Fetal Brain Male	brain
25	chr6:143592000-143592400	Enhancers	Brain Cingulate Gyrus	brain
26	chr6:143592000-143592400	Enhancers	Left Ventricle	heart
27	chr6:143592000-143592400	Enhancers	Psoas Muscle	Psoas
28	chr6:143592000-143592400	Enhancers	Right Atrium	heart
29	chr6:143592000-143592600	Enhancers	Muscle Satellite Cultured Cells	--
30	chr6:143592000-143592600	Enhancers	Brain Anterior Caudate	brain
31	chr6:143592000-143592600	Enhancers	Brain Inferior Temporal Lobe	brain
32	chr6:143592000-143592600	Enhancers	Duodenum Smooth Muscle	Duodenum
33	chr6:143592000-143592600	Enhancers	HSMM	muscle
34	chr6:143592000-143592600	Enhancers	HSMMtube	muscle
35	chr6:143592000-143592600	Enhancers	NH-A	brain
36	chr6:143592000-143592800	Enhancers	Stomach Smooth Muscle	stomach
37	chr6:143592000-143593000	Enhancers	Colon Smooth Muscle	Colon
38	chr6:143592000-143593400	Enhancers	Rectal Smooth Muscle	rectum
39	chr6:143592200-143593600	Enhancers	NHDF-Ad	bronchial
40	chr6:143592200-143593800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr6:143592200-143605600	Weak transcription	Adipose Nuclei	Adipose

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