Variant report

Variant	rs6941767
Chromosome Location	chr6:37289372-37289373
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:37286882..37290245-chr6:37291782..37293649,3	K562	blood:
2	chr6:37269968..37271528-chr6:37287262..37289720,2	MCF-7	breast:
3	chr6:37282286..37284247-chr6:37288615..37291603,3	MCF-7	breast:
4	chr6:37288100..37290263-chr6:37321545..37323620,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000112130	Chromatin interaction

rs_ID	r²[population]
rs11548070	1.00[YRI][hapmap]
rs11961544	0.95[YRI][hapmap]
rs11961609	0.95[YRI][hapmap]
rs11961942	0.95[YRI][hapmap]
rs11963012	0.94[YRI][hapmap]
rs11964774	0.94[YRI][hapmap]
rs11965707	0.95[YRI][hapmap]
rs11966215	0.94[YRI][hapmap]
rs11966913	0.94[YRI][hapmap]
rs11970265	0.80[YRI][hapmap]
rs149705	0.82[YRI][hapmap]
rs149707	0.80[YRI][hapmap]
rs195422	0.80[YRI][hapmap]
rs6903801	0.95[YRI][hapmap]
rs6905400	1.00[YRI][hapmap]
rs6906388	0.93[YRI][hapmap]
rs6907008	0.95[YRI][hapmap]
rs6908216	1.00[YRI][hapmap]
rs6911541	0.95[YRI][hapmap]
rs6916893	0.95[YRI][hapmap]
rs6919142	0.95[YRI][hapmap]
rs6919900	0.95[YRI][hapmap]
rs6920007	0.95[YRI][hapmap]
rs6926402	0.95[YRI][hapmap]
rs6940193	0.95[YRI][hapmap]
rs7740399	1.00[YRI][hapmap]
rs7748450	0.95[YRI][hapmap]
rs7748706	0.95[YRI][hapmap]
rs7750754	0.95[YRI][hapmap]
rs7759469	0.95[YRI][hapmap]
rs7762309	0.95[YRI][hapmap]
rs7766759	0.85[YRI][hapmap]
rs7773185	0.95[YRI][hapmap]
rs7773273	1.00[YRI][hapmap]

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37277600-37298600	Weak transcription	Psoas Muscle	Psoas
2	chr6:37279200-37290000	Strong transcription	Liver	Liver
3	chr6:37279400-37291400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
4	chr6:37279400-37292400	Strong transcription	Primary T cells from cord blood	blood
5	chr6:37279600-37289600	Strong transcription	Placenta	Placenta
6	chr6:37279600-37291000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr6:37279600-37291400	Strong transcription	Primary T helper cells fromperipheralblood	blood
8	chr6:37279800-37290000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
9	chr6:37279800-37292400	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr6:37280000-37291200	Strong transcription	Fetal Muscle Leg	muscle
11	chr6:37280000-37291600	Strong transcription	Thymus	Thymus
12	chr6:37280000-37292800	Strong transcription	Primary neutrophils fromperipheralblood	blood
13	chr6:37280000-37292800	Strong transcription	Dnd41	blood
14	chr6:37280200-37290000	Strong transcription	HUES64 Cell Line	embryonic stem cell
15	chr6:37280200-37290600	Strong transcription	Adipose Nuclei	Adipose
16	chr6:37280200-37290800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr6:37280200-37291000	Strong transcription	HUES6 Cell Line	embryonic stem cell
18	chr6:37280200-37291400	Strong transcription	Primary T cells fromperipheralblood	blood
19	chr6:37280400-37289600	Strong transcription	iPS-15b Cell Line	embryonic stem cell
20	chr6:37280400-37289600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr6:37280400-37290800	Strong transcription	Duodenum Mucosa	Duodenum
22	chr6:37280400-37290800	Strong transcription	Lung	lung
23	chr6:37280400-37290800	Strong transcription	Rectal Mucosa Donor 29	rectum
24	chr6:37280400-37290800	Strong transcription	Skeletal Muscle Male	skeletal muscle
25	chr6:37280400-37291000	Strong transcription	Fetal Stomach	stomach
26	chr6:37280600-37289600	Strong transcription	Primary B cells from peripheral blood	blood
27	chr6:37280600-37289800	Strong transcription	HUES48 Cell Line	embryonic stem cell
28	chr6:37280600-37289800	Strong transcription	Sigmoid Colon	Sigmoid Colon
29	chr6:37280600-37290800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
30	chr6:37280600-37291000	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
31	chr6:37280600-37291200	Strong transcription	Fetal Intestine Small	intestine
32	chr6:37280600-37291200	Strong transcription	Spleen	Spleen
33	chr6:37280600-37291400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr6:37280600-37291400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
35	chr6:37280600-37291600	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr6:37280600-37292000	Strong transcription	H1 Cell Line	embryonic stem cell
37	chr6:37280800-37289400	Strong transcription	Fetal Intestine Large	intestine
38	chr6:37280800-37289600	Strong transcription	Rectal Smooth Muscle	rectum
39	chr6:37280800-37289600	Strong transcription	Skeletal Muscle Female	skeletal muscle
40	chr6:37280800-37290600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr6:37280800-37290600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
42	chr6:37281200-37289400	Strong transcription	Primary B cells from cord blood	blood
43	chr6:37281400-37290200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
44	chr6:37281400-37290800	Strong transcription	Rectal Mucosa Donor 31	rectum
45	chr6:37282800-37293000	Strong transcription	Fetal Thymus	thymus
46	chr6:37283200-37289400	Strong transcription	HUVEC	blood vessel
47	chr6:37283200-37289800	Strong transcription	Primary T helper cells PMA-I stimulated	--
48	chr6:37283400-37292200	Strong transcription	Primary monocytes fromperipheralblood	blood
49	chr6:37283800-37289600	Strong transcription	Hela-S3	cervix
50	chr6:37283800-37290600	Strong transcription	K562	blood

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