The 2.0 version of rSNPBase

Variant report

Variant rs6950173
Chromosome Location chr7:22169520-22169521
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:22149800-22177600 Weak transcription H1 Cell Line embryonic stem cell
2 chr7:22150000-22177800 Weak transcription HUES48 Cell Line embryonic stem cell
3 chr7:22150200-22173200 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr7:22153000-22193000 Strong transcription Dnd41 blood
5 chr7:22154400-22169800 Weak transcription Fetal Muscle Trunk muscle
6 chr7:22155600-22178200 Weak transcription H9 Cell Line embryonic stem cell
7 chr7:22156000-22181000 Weak transcription Gastric stomach
8 chr7:22156000-22186600 Weak transcription Brain Germinal Matrix brain
9 chr7:22156800-22186400 Strong transcription Liver Liver
10 chr7:22157800-22174600 Weak transcription Colonic Mucosa Colon
11 chr7:22159800-22172400 Weak transcription Fetal Stomach stomach
12 chr7:22159800-22175800 Weak transcription HSMMtube muscle
13 chr7:22159800-22214000 Weak transcription Small Intestine intestine
14 chr7:22160000-22173600 Strong transcription HepG2 liver
15 chr7:22160400-22183000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr7:22161600-22169600 Weak transcription Aorta Aorta
17 chr7:22162000-22174800 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr7:22162200-22181400 Weak transcription Primary T cells from cord blood blood
19 chr7:22162200-22186600 Weak transcription GM12878-XiMat blood
20 chr7:22162200-22198000 Weak transcription Rectal Smooth Muscle rectum
21 chr7:22162400-22177800 Weak transcription Fetal Muscle Leg muscle
22 chr7:22163000-22179000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr7:22163000-22187800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr7:22163000-22190600 Strong transcription Fetal Thymus thymus
25 chr7:22163200-22169600 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr7:22163200-22178800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr7:22163200-22181000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr7:22163200-22186800 Weak transcription Right Atrium heart
29 chr7:22163600-22179000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr7:22164200-22173800 Strong transcription Duodenum Mucosa Duodenum
31 chr7:22164800-22170400 Strong transcription Fetal Intestine Large intestine
32 chr7:22165000-22174200 Weak transcription Psoas Muscle Psoas
33 chr7:22165400-22169600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr7:22165400-22171800 Weak transcription Brain Angular Gyrus brain
35 chr7:22165400-22183400 Weak transcription Primary B cells from cord blood blood
36 chr7:22166000-22172200 Weak transcription Esophagus oesophagus
37 chr7:22166200-22178000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr7:22166800-22170400 Strong transcription Pancreas Pancrea
39 chr7:22167600-22170200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr7:22167600-22170200 Strong transcription Rectal Mucosa Donor 31 rectum
41 chr7:22167600-22170200 Strong transcription Thymus Thymus
42 chr7:22167600-22171200 Strong transcription Brain Hippocampus Middle brain
43 chr7:22168000-22170000 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr7:22168000-22172000 Strong transcription Brain Anterior Caudate brain
45 chr7:22168000-22176200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr7:22168000-22178000 Weak transcription Adipose Nuclei Adipose
47 chr7:22168000-22195800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr7:22168000-22195800 Weak transcription NHEK skin
49 chr7:22168200-22170200 Strong transcription Fetal Intestine Small intestine
50 chr7:22168400-22172000 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015