Variant report

Variant	rs6960319
Chromosome Location	chr7:147258631-147258632
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12703926	0.85[CEU][hapmap];0.84[CHB][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs12703950	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13225249	0.96[EUR][1000 genomes]
rs13236486	0.99[EUR][1000 genomes]
rs35994590	0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3915303	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4425670	1.00[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap]
rs700318	0.89[CHB][hapmap];0.91[JPT][hapmap];0.88[ASN][1000 genomes]
rs851827	0.96[CEU][hapmap];0.89[CHB][hapmap];0.91[JPT][hapmap];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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