Variant report

Variant	rs6964065
Chromosome Location	chr7:103547639-103547640
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10216302	0.89[ASN][1000 genomes]
rs10230894	0.89[ASN][1000 genomes]
rs10246378	0.89[ASN][1000 genomes]
rs10458286	0.82[ASN][1000 genomes]
rs10458287	0.82[ASN][1000 genomes]
rs17157125	0.89[ASN][1000 genomes]
rs28376312	0.89[ASN][1000 genomes]
rs28422835	0.89[ASN][1000 genomes]
rs58130032	0.88[ASN][1000 genomes]
rs67193600	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv523466	chr7:103547135-103567525	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103546200-103547800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr7:103546400-103548400	Weak transcription	HepG2	liver
3	chr7:103547400-103548400	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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