Variant report

Variant	rs6972606
Chromosome Location	chr7:137498611-137498612
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs10233812	1.00[AMR][1000 genomes]
rs6950955	1.00[AMR][1000 genomes]
rs6977641	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137486000-137501800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr7:137486600-137501800	Weak transcription	HSMMtube	muscle
3	chr7:137490200-137501600	Weak transcription	Osteobl	bone
4	chr7:137490200-137504600	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr7:137490200-137505200	Weak transcription	NH-A	brain
6	chr7:137490400-137501000	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr7:137490400-137505200	Weak transcription	HSMM	muscle
8	chr7:137494000-137505600	Weak transcription	Aorta	Aorta
9	chr7:137494400-137504400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr7:137497800-137498800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr7:137497800-137499400	Enhancers	Fetal Brain Male	brain
12	chr7:137498000-137499000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr7:137498000-137499200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr7:137498200-137504400	Weak transcription	Fetal Brain Female	brain
15	chr7:137498600-137499200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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