Variant report

Variant	rs6975461
Chromosome Location	chr7:147333788-147333789
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10243377	0.98[EUR][1000 genomes]
rs10258558	0.98[EUR][1000 genomes]
rs17170626	0.98[EUR][1000 genomes]
rs28728281	0.98[EUR][1000 genomes]
rs55688811	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56130548	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73164392	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73164393	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73164394	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73164396	0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147333200-147338400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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