Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10097247	0.80[ASN][1000 genomes]
rs10110057	0.80[ASN][1000 genomes]
rs10110652	0.80[ASN][1000 genomes]
rs10110764	0.80[ASN][1000 genomes]
rs10780164	0.80[ASN][1000 genomes]
rs11777784	0.86[ASN][1000 genomes]
rs11781664	0.86[ASN][1000 genomes]
rs11784184	0.80[ASN][1000 genomes]
rs11786540	0.81[ASN][1000 genomes]
rs11786726	0.80[ASN][1000 genomes]
rs11786733	0.80[ASN][1000 genomes]
rs12547310	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17754149	0.86[ASN][1000 genomes]
rs17754218	0.91[ASN][1000 genomes]
rs2199694	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4256620	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6558646	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6558648	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73171481	0.86[ASN][1000 genomes]
rs73171482	0.86[ASN][1000 genomes]
rs73171483	0.86[ASN][1000 genomes]
rs73171484	0.89[ASN][1000 genomes]
rs7835692	0.98[ASN][1000 genomes]
rs897445	0.80[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2283200-2296200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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