Variant report

Variant	rs7835692
Chromosome Location	chr8:2289367-2289368
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11777784	0.84[ASN][1000 genomes]
rs11781664	0.84[ASN][1000 genomes]
rs12547310	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs17754149	0.84[ASN][1000 genomes]
rs17754218	0.89[ASN][1000 genomes]
rs2199694	0.96[ASN][1000 genomes]
rs4256620	0.93[ASN][1000 genomes]
rs6558646	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6558648	0.98[ASN][1000 genomes]
rs6981064	0.98[ASN][1000 genomes]
rs73171481	0.84[ASN][1000 genomes]
rs73171482	0.84[ASN][1000 genomes]
rs73171483	0.84[ASN][1000 genomes]
rs73171484	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:2283200-2296200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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