Variant report

rSNPs within LD-proxies of this variant (count:21)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032681	chr8:119153316-119609948	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv539737	chr8:119153316-119609948	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
3	nsv831443	chr8:119390590-119590662	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

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Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119462600-119485000	Weak transcription	Brain Cingulate Gyrus	brain
2	chr8:119475600-119480600	Weak transcription	Lung	lung
3	chr8:119476200-119484600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:119476800-119484600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr8:119476800-119485200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr8:119477600-119484800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr8:119478000-119481200	Weak transcription	Brain Hippocampus Middle	brain
8	chr8:119478200-119481200	Weak transcription	Brain Substantia Nigra	brain
9	chr8:119478400-119481200	Weak transcription	Brain Angular Gyrus	brain
10	chr8:119479000-119481600	Enhancers	Liver	Liver
11	chr8:119479800-119481600	Enhancers	Fetal Heart	heart
12	chr8:119480000-119481000	Weak transcription	Thymus	Thymus
13	chr8:119480000-119481600	Enhancers	Right Atrium	heart
14	chr8:119480400-119480600	Enhancers	Psoas Muscle	Psoas
15	chr8:119480400-119480800	Enhancers	Breast Myoepithelial Primary Cells	Breast
16	chr8:119480400-119481200	Enhancers	GM12878-XiMat	blood
17	chr8:119480400-119481400	Enhancers	Brain Germinal Matrix	brain
18	chr8:119480400-119481600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr8:119480400-119481600	Enhancers	Adipose Nuclei	Adipose
20	chr8:119480400-119481600	Enhancers	Duodenum Mucosa	Duodenum

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