Variant report

Variant	rs7006908
Chromosome Location	chr8:67193868-67193869
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10092151	1.00[ASN][1000 genomes]
rs10095182	1.00[ASN][1000 genomes]
rs10095818	1.00[ASN][1000 genomes]
rs10099908	1.00[ASN][1000 genomes]
rs10100129	0.83[EUR][1000 genomes]
rs10106904	0.82[EUR][1000 genomes]
rs10108841	1.00[ASN][1000 genomes]
rs10112406	0.82[EUR][1000 genomes]
rs10113313	1.00[ASN][1000 genomes]
rs10504395	0.82[EUR][1000 genomes]
rs11784186	1.00[ASN][1000 genomes]
rs1426905	1.00[ASN][1000 genomes]
rs1473817	1.00[ASN][1000 genomes]
rs16932829	1.00[ASN][1000 genomes]
rs17320665	1.00[ASN][1000 genomes]
rs1863639	1.00[ASN][1000 genomes]
rs28377354	1.00[ASN][1000 genomes]
rs28497070	1.00[ASN][1000 genomes]
rs28505853	1.00[ASN][1000 genomes]
rs28609784	1.00[ASN][1000 genomes]
rs28664134	1.00[ASN][1000 genomes]
rs4291250	1.00[ASN][1000 genomes]
rs4448262	1.00[ASN][1000 genomes]
rs56176008	1.00[ASN][1000 genomes]
rs6988640	0.90[EUR][1000 genomes]
rs73691530	1.00[ASN][1000 genomes]
rs9657083	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	nsv1017345	chr8:67184975-67209954	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv6235	chr8:67188081-67232737	Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67187000-67197200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:67190400-67194400	Weak transcription	Fetal Muscle Trunk	muscle
3	chr8:67192000-67195600	Enhancers	Fetal Muscle Leg	muscle
4	chr8:67192200-67194200	Enhancers	HSMMtube	muscle
5	chr8:67193400-67194800	Enhancers	Fetal Heart	heart
6	chr8:67193800-67194200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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