Variant report

Variant	rs7011437
Chromosome Location	chr8:61396350-61396351
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10504309	1.00[EUR][1000 genomes]
rs11989127	1.00[EUR][1000 genomes]
rs11992608	1.00[EUR][1000 genomes]
rs16926108	1.00[EUR][1000 genomes]
rs16926368	1.00[AMR][1000 genomes]
rs16926384	1.00[AMR][1000 genomes]
rs3898502	1.00[AMR][1000 genomes]
rs41272433	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6982241	1.00[AMR][1000 genomes]
rs7004263	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73250102	1.00[EUR][1000 genomes]
rs73251503	1.00[EUR][1000 genomes]
rs7814111	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7827147	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7840220	1.00[AMR][1000 genomes]
rs7841769	1.00[EUR][1000 genomes]
rs7841906	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917756	chr8:60942299-61862796	Enhancers Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
2	nsv971314	chr8:61359401-61436209	Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:61396200-61396400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:61396200-61396400	Enhancers	Placenta Amnion	Placenta Amnion

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links