Variant report

Variant	rs7011623
Chromosome Location	chr8:130525397-130525398
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130511733..130514870-chr8:130523841..130528014,4	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10101476	0.89[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10106330	0.93[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11774511	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11782225	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11786408	0.93[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12545943	0.93[CEU][hapmap];0.83[CHB][hapmap];0.95[JPT][hapmap];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12675978	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1961510	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55977190	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6470735	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6470738	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67184710	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67751243	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6985031	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6996139	0.90[CEU][hapmap];0.83[CHB][hapmap];0.95[JPT][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7000021	0.93[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7016061	1.00[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7831581	0.90[CEU][hapmap];0.83[CHB][hapmap];0.95[JPT][hapmap];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7835768	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7839288	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7839408	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130521200-130526600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr8:130521400-130526200	Weak transcription	NH-A	brain
3	chr8:130521400-130526400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:130521400-130526400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:130521400-130526400	Weak transcription	HSMM	muscle
6	chr8:130521400-130526400	Weak transcription	Osteobl	bone
7	chr8:130521400-130526600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr8:130522200-130526000	Weak transcription	NHEK	skin
9	chr8:130522200-130526200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr8:130522400-130526200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr8:130523000-130526000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr8:130523000-130526200	Weak transcription	HMEC	breast
13	chr8:130523800-130527000	Enhancers	Fetal Intestine Small	intestine
14	chr8:130523800-130528000	Enhancers	Fetal Intestine Large	intestine
15	chr8:130524200-130526200	Weak transcription	Fetal Heart	heart
16	chr8:130524200-130526400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr8:130524200-130527600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr8:130524600-130525600	Weak transcription	HUES64 Cell Line	embryonic stem cell
19	chr8:130524600-130526200	Strong transcription	K562	blood
20	chr8:130524600-130526400	Weak transcription	Dnd41	blood

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