Variant report

Variant	rs7022263
Chromosome Location	chr9:96128902-96128903
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10761216	0.88[AFR][1000 genomes]
rs10761217	0.88[AFR][1000 genomes]
rs10821109	1.00[YRI][hapmap]
rs10992711	0.91[AFR][1000 genomes]
rs10992713	0.88[AFR][1000 genomes]
rs11789033	0.86[CEU][hapmap]
rs2841680	0.80[CEU][hapmap]
rs2841681	0.82[CEU][hapmap]
rs3933798	0.83[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893576	chr9:95789960-96158277	Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:96125000-96129200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr9:96126800-96129200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr9:96126800-96130400	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr9:96127800-96129400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr9:96127800-96129400	Strong transcription	Right Atrium	heart
6	chr9:96128400-96129000	Enhancers	H9 Cell Line	embryonic stem cell
7	chr9:96128600-96129000	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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